Spinacia oleracea (spinach): 110786718
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Entry
110786718 CDS
T05137
Name
(RefSeq) THO complex subunit 5A-like
KO
K13174
THO complex subunit 5
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110786718
09122 Translation
03013 Nucleocytoplasmic transport
110786718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110786718
03041 Spliceosome [BR:
soe03041
]
110786718
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110786718
Spliceosome [BR:
soe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110786718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
TBX2-3_RD
Motif
Other DBs
NCBI-GeneID:
110786718
NCBI-ProteinID:
XP_021846983
UniProt:
A0A9R0JUG1
LinkDB
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Position
3:43609540..43626838
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AA seq
823 aa
AA seq
DB search
MDVKMEDAAAAAAAAAAATATATSATSEDIIVLSKTAEKVEKSPYDMLKESKISVEEIVA
KMLSLKKDDKAKPELRELVTQMFLHFVSLRQANRNILIEEDRVKAETERVKAPVDSTSLQ
LHNLMYEKSHYLKAIKACKDFKSKYPDIQLVTEAEFFSQAPEEFKGIAISNETAHNVMLK
RLNYELFQRKELCKFREKLDQKKKSLLETIANRKKFLSSLPSHLKALKKASLPAQNQLGL
LHTKKQKQLHAAELLPPPLYIIYSQFMAQKEAFGENIDLEITGSLKDAQVFVRRQTYKDT
GTSSMQESSRIDDDVVDEEDDGQRRRKRPKKVASKENVDTAGIYQAHPLRIILHVYDNEV
CEPKSARLVTLKFEYLFKLNVVCVGVEGSDQGSENNILCNLFPDDKGLELPQQSAKLLLD
DGAEFDERRTMRPYKWAQHLAGIDFLPEVSPSSTSNEAGKFETGKDAVVSGLSLYRHQNR
VQTVVQRVRLRTKAQLALSEQLDSLTALKWPTLICQSVPWAAHEHLCFLHRWSHVGSSLN
QDGSLSRVDVEQDHDAFDANMAGRASSSKEEGIMTEDGELPSLTPATVVTDEKSSAYLNQ
GSGVKHSKRMALISKSIAVPVKTARNQSFGRYEEDTDLMMDSESEVDDTTNNDKEIECAV
DEGNSWVDYGIKEFNLVLTRKRDAGEGNVDLEVKIRISKEYPLRPPLFKLSLLSQYSGGN
SSPIDHSVWYNELRAMEAEVNVHILKMLPPNEENNILSHQVHCLAMIFDLYLNEASQPSQ
GRKCKDSDIGSVSGGLKARSFRGRDRRNMIPWKDMELTPGYPF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaagatggaagatgcggcggcggcagcggcagcggcagcggcagcgacagcg
acagcgacatcggcgacgtcggaagacattattgttctttctaaaaccgcagaaaaggta
gagaaatctccgtatgatatgctgaaagagagcaagatttctgtggaagagatagttgcg
aagatgctttctctcaaaaaggacgacaaagcaaaacctgagcttcgcgagcttgttact
cagatgttcctccacttcgtctcacttcgccaggcgaaccgtaatatcttgattgaagaa
gatcgtgtgaaagctgagactgaacgtgtaaaagcacctgtggactcaacgagtttgcag
cttcataatttgatgtatgagaagagccactacctgaaagctataaaggcatgcaaagac
ttcaaatccaaatatcctgacattcaacttgttaccgaggctgagtttttcagtcaagct
cctgaagagtttaaaggaattgccatatcaaatgaaactgctcacaatgtgatgttgaag
aggcttaattatgagcttttccagagaaaagagctttgcaagtttcgcgagaagctggac
cagaagaagaaaagtcttttggagaccattgccaacagaaagaaatttttgtcaagtctc
ccctcacatctgaaggctttaaagaaagcgtcattacctgcacaaaaccaactgggactt
ttacatacaaagaaacaaaaacagctgcatgcggcggagttgctgcctccgccattgtat
attatttactctcagttcatggcccaaaaagaagcttttggggaaaatattgacttggaa
ataactggaagcttgaaagatgctcaggtctttgtccggcggcaaacatataaagacact
ggcacatcatccatgcaggagagttcacggatagatgatgatgtagtggatgaggaagat
gatggacaaaggaggagaaaacggcccaaaaaagtggctagcaaggaaaatgttgacaca
gctgggatatatcaagctcatcctctaagaatcattctccatgtgtacgacaatgaagtt
tgcgaaccaaagtctgccagacttgttactttgaagtttgaatatctgtttaagctgaat
gttgtttgtgtgggtgttgaggggtctgatcaagggtctgaaaataacattctgtgcaat
ttattccctgatgataagggccttgaactgcctcagcagtcggctaagctcctcttggat
gatggagcagaatttgatgaaagacgaactatgcgtccatataaatgggcccagcatttg
gcaggaatcgactttttgccagaggtgtccccctcatccactagtaatgaagctggcaag
tttgaaactggtaaggatgctgttgtctcaggactttcactgtatcggcatcaaaaccga
gtgcagacggtggtgcaaagagtcaggttaaggacgaaggctcagcttgcactttcggaa
cagcttgattcacttacagcccttaaatggcccactctgatctgtcaaagtgttccatgg
gccgcacatgaacacctgtgttttctgcatagatggtcacatgtaggatcctctcttaac
caggatggttctctatccagagttgatgtggaacaagaccatgatgcttttgatgctaac
atggctggaagagctagttcctctaaggaagaggggattatgacggaagatggggagctt
ccatctttgactccagccacagttgtgactgatgagaaatctagtgcttatctaaatcaa
ggatcaggtgttaaacattctaaacggatggcactaatctcaaaaagtattgcagttcca
gtcaaaactgccagaaaccagagttttgggcgatatgaggaggacacagaccttatgatg
gatagtgaaagtgaagtagatgacaccaccaacaatgacaaggaaattgaatgtgctgtt
gacgaggggaattcttgggtggattacggaattaaagagtttaatcttgttttaacccgg
aaaagagatgcgggagaggggaacgttgatcttgaagtcaagattaggataagcaaggag
tatcctctcaggcctcctcttttcaaattgagtttactctcacaatattctggtggaaat
agttcacccattgaccactctgtgtggtacaatgaacttcgagccatggaagctgaggtg
aatgttcacatactaaagatgttacctcctaatgaagaaaacaatattttatcacatcaa
gttcattgtcttgccatgatcttcgacctctacttaaatgaggcttctcaaccttcacaa
gggagaaagtgtaaagattctgatatcggctcggtcagcggtggtctcaaggccagatct
tttaggggaagggatcgtcgaaacatgataccttggaaggatatggaattaactccaggc
tatcctttttga
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