KEGG   Spinacia oleracea (spinach): 110786718
Entry
110786718         CDS       T05137                                 
Name
(RefSeq) THO complex subunit 5A-like
  KO
K13174  THO complex subunit 5
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03013  Nucleocytoplasmic transport
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110786718
  09122 Translation
   03013 Nucleocytoplasmic transport
    110786718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soe03019]
    110786718
   03041 Spliceosome [BR:soe03041]
    110786718
Messenger RNA biogenesis [BR:soe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110786718
Spliceosome [BR:soe03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110786718
SSDB
Motif
Pfam: FmiP_Thoc5 RWD TBX2-3_RD
Other DBs
NCBI-GeneID: 110786718
NCBI-ProteinID: XP_021846983
UniProt: A0A9R0JUG1
LinkDB
Position
3:43609540..43626838
AA seq 823 aa
MDVKMEDAAAAAAAAAAATATATSATSEDIIVLSKTAEKVEKSPYDMLKESKISVEEIVA
KMLSLKKDDKAKPELRELVTQMFLHFVSLRQANRNILIEEDRVKAETERVKAPVDSTSLQ
LHNLMYEKSHYLKAIKACKDFKSKYPDIQLVTEAEFFSQAPEEFKGIAISNETAHNVMLK
RLNYELFQRKELCKFREKLDQKKKSLLETIANRKKFLSSLPSHLKALKKASLPAQNQLGL
LHTKKQKQLHAAELLPPPLYIIYSQFMAQKEAFGENIDLEITGSLKDAQVFVRRQTYKDT
GTSSMQESSRIDDDVVDEEDDGQRRRKRPKKVASKENVDTAGIYQAHPLRIILHVYDNEV
CEPKSARLVTLKFEYLFKLNVVCVGVEGSDQGSENNILCNLFPDDKGLELPQQSAKLLLD
DGAEFDERRTMRPYKWAQHLAGIDFLPEVSPSSTSNEAGKFETGKDAVVSGLSLYRHQNR
VQTVVQRVRLRTKAQLALSEQLDSLTALKWPTLICQSVPWAAHEHLCFLHRWSHVGSSLN
QDGSLSRVDVEQDHDAFDANMAGRASSSKEEGIMTEDGELPSLTPATVVTDEKSSAYLNQ
GSGVKHSKRMALISKSIAVPVKTARNQSFGRYEEDTDLMMDSESEVDDTTNNDKEIECAV
DEGNSWVDYGIKEFNLVLTRKRDAGEGNVDLEVKIRISKEYPLRPPLFKLSLLSQYSGGN
SSPIDHSVWYNELRAMEAEVNVHILKMLPPNEENNILSHQVHCLAMIFDLYLNEASQPSQ
GRKCKDSDIGSVSGGLKARSFRGRDRRNMIPWKDMELTPGYPF
NT seq 2472 nt   +upstreamnt  +downstreamnt
atggatgttaagatggaagatgcggcggcggcagcggcagcggcagcggcagcgacagcg
acagcgacatcggcgacgtcggaagacattattgttctttctaaaaccgcagaaaaggta
gagaaatctccgtatgatatgctgaaagagagcaagatttctgtggaagagatagttgcg
aagatgctttctctcaaaaaggacgacaaagcaaaacctgagcttcgcgagcttgttact
cagatgttcctccacttcgtctcacttcgccaggcgaaccgtaatatcttgattgaagaa
gatcgtgtgaaagctgagactgaacgtgtaaaagcacctgtggactcaacgagtttgcag
cttcataatttgatgtatgagaagagccactacctgaaagctataaaggcatgcaaagac
ttcaaatccaaatatcctgacattcaacttgttaccgaggctgagtttttcagtcaagct
cctgaagagtttaaaggaattgccatatcaaatgaaactgctcacaatgtgatgttgaag
aggcttaattatgagcttttccagagaaaagagctttgcaagtttcgcgagaagctggac
cagaagaagaaaagtcttttggagaccattgccaacagaaagaaatttttgtcaagtctc
ccctcacatctgaaggctttaaagaaagcgtcattacctgcacaaaaccaactgggactt
ttacatacaaagaaacaaaaacagctgcatgcggcggagttgctgcctccgccattgtat
attatttactctcagttcatggcccaaaaagaagcttttggggaaaatattgacttggaa
ataactggaagcttgaaagatgctcaggtctttgtccggcggcaaacatataaagacact
ggcacatcatccatgcaggagagttcacggatagatgatgatgtagtggatgaggaagat
gatggacaaaggaggagaaaacggcccaaaaaagtggctagcaaggaaaatgttgacaca
gctgggatatatcaagctcatcctctaagaatcattctccatgtgtacgacaatgaagtt
tgcgaaccaaagtctgccagacttgttactttgaagtttgaatatctgtttaagctgaat
gttgtttgtgtgggtgttgaggggtctgatcaagggtctgaaaataacattctgtgcaat
ttattccctgatgataagggccttgaactgcctcagcagtcggctaagctcctcttggat
gatggagcagaatttgatgaaagacgaactatgcgtccatataaatgggcccagcatttg
gcaggaatcgactttttgccagaggtgtccccctcatccactagtaatgaagctggcaag
tttgaaactggtaaggatgctgttgtctcaggactttcactgtatcggcatcaaaaccga
gtgcagacggtggtgcaaagagtcaggttaaggacgaaggctcagcttgcactttcggaa
cagcttgattcacttacagcccttaaatggcccactctgatctgtcaaagtgttccatgg
gccgcacatgaacacctgtgttttctgcatagatggtcacatgtaggatcctctcttaac
caggatggttctctatccagagttgatgtggaacaagaccatgatgcttttgatgctaac
atggctggaagagctagttcctctaaggaagaggggattatgacggaagatggggagctt
ccatctttgactccagccacagttgtgactgatgagaaatctagtgcttatctaaatcaa
ggatcaggtgttaaacattctaaacggatggcactaatctcaaaaagtattgcagttcca
gtcaaaactgccagaaaccagagttttgggcgatatgaggaggacacagaccttatgatg
gatagtgaaagtgaagtagatgacaccaccaacaatgacaaggaaattgaatgtgctgtt
gacgaggggaattcttgggtggattacggaattaaagagtttaatcttgttttaacccgg
aaaagagatgcgggagaggggaacgttgatcttgaagtcaagattaggataagcaaggag
tatcctctcaggcctcctcttttcaaattgagtttactctcacaatattctggtggaaat
agttcacccattgaccactctgtgtggtacaatgaacttcgagccatggaagctgaggtg
aatgttcacatactaaagatgttacctcctaatgaagaaaacaatattttatcacatcaa
gttcattgtcttgccatgatcttcgacctctacttaaatgaggcttctcaaccttcacaa
gggagaaagtgtaaagattctgatatcggctcggtcagcggtggtctcaaggccagatct
tttaggggaagggatcgtcgaaacatgataccttggaaggatatggaattaactccaggc
tatcctttttga

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