Spinacia oleracea (spinach): 110786754
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Entry
110786754 CDS
T05137
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Module
soe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110786754
Enzymes [BR:
soe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110786754
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
110786754
NCBI-ProteinID:
XP_056690405
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Position
1:complement(107874306..107888161)
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AA seq
372 aa
AA seq
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MDYGAVGDGVQDDSPAFSKAWADVCAVTGDTPTLTVPVFQLGAQTLTIPTGKTFLLTPIA
FNGPCKSSSIHVEIQGKLVAPDKRDKWKKCEANCWIVFASIENLIVEGSGEINGKGSIWW
QALCLANCNGLELKGLTHVDSPKCHISISGCNNSIISNLHILAPENSLNTDGIDIVSSSH
LHISDSIIQTGDDCIAIGSETSWINITGITCGPGHGISIGSLGKDGEIARVEEIHVRNCT
FNGSLNGARIKTWQGGKGYARNIIFEEIPLIDVGNPIIIDQYYCNGDHTKCATSAEKSAV
AVTGVSYRGFHGTSTTSAAISLNCSNTVACTGIVMESIDIKSSNGSNDTFAFCINAHGKQ
SGVSPQVPCLTP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggattatggagccgttggagatggtgtacaagacgatagtcccgcgttttcaaaagca
tgggcagacgtatgtgctgttacaggtgacactcctacactaactgttccggtgtttcaa
ttgggagcccaaacactaacaataccaacagggaagacattcctattaactccaattgct
ttcaatggtccttgcaaatcaagcagcattcatgttgagatccaaggaaaattggtggca
cccgacaaacgcgataaatggaaaaagtgtgaagcaaactgttggatagtttttgcaagc
attgagaacctaattgtagaaggatcaggagagatcaatggcaaaggatcaatttggtgg
caggctttatgtttggcaaattgcaatggtcttgaattaaaaggactaactcatgtagac
agtcccaaatgtcatatatcaattagtggttgtaataattcaattatctctaatcttcat
attttggctcctgaaaacagcctcaatactgatggtattgatattgtttcttcatctcat
cttcatataagtgattccattatccaaacaggtgatgattgtatagcaataggatcagag
acatcatggattaacataaccgggatcacttgtggaccaggccacggtataagcattgga
agtttgggaaaggacggcgaaattgctagagtagaagaaattcatgtaagaaattgcact
tttaatggaagtttaaacggcgcgagaatcaagacatggcagggaggaaagggttatgca
agaaacataatatttgaagaaatccctttgatagatgttggaaacccgataataatagac
caatattactgcaatggagatcatacaaaatgtgcaacgtcagcagagaaatcggctgtg
gcggtaacgggtgtaagctatagaggatttcatggaacatcaacaacatcggcagcaata
agtttaaattgcagcaacacagttgcttgcacaggaatcgtgatggagtccatcgatatt
aaatcttcaaatggttcaaatgatacttttgccttttgcattaatgctcatggaaaacaa
tcaggtgtttcacctcaagttccttgcctaactccatga
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