Spinacia oleracea (spinach): 110787069
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Entry
110787069 CDS
T05137
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110787069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110787069
04121 Ubiquitin system [BR:
soe04121
]
110787069
03036 Chromosome and associated proteins [BR:
soe03036
]
110787069
03400 DNA repair and recombination proteins [BR:
soe03400
]
110787069
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110787069
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110787069
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110787069
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110787069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING_6
Prok-RING_4
PTCB-BRCT
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-RING_2
PHD_NSD
RTT107_BRCT_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
110787069
NCBI-ProteinID:
XP_021847326
UniProt:
A0A9R0IDI3
LinkDB
All DBs
Position
6:complement(128078766..128084633)
Genome browser
AA seq
644 aa
AA seq
DB search
MAESQTHAHFLNPWVLHLQKLELELKCSLCLKVYNKPILLPCNHIFCSSCVPKSNLFGGL
DCPLCKISYFEQDLRQAPFVQNVVNIYRSMKASTHMLNPDLGRVKSEIPNQIAKKQIDCS
PPGNSNSGTCGNVEQHEDVDVDVNQIESSSQDSPPSSGISKGVDVDSRDPGSSYDTAGKL
PSKKSSKRNADDFKTKDNSHDQSGKKQKQFLSQCLPQLRQGSTSSLAADLQNAASAGSEM
ANTGNDPGNQQAVESDSASLINFFCAFCQSWKITEGSGPMQHFDKGRQVFGSEAGRSSVL
HVHQSCIEWAPQIYYENDTTMKNLDKELARAGKLKCTSCGVKGAALGCFAKSCRRSYHVP
CAYEVTGCRWDMDDYLMLCPAHVSNKFPSEKFKKPAVKKCSSAKIVVEKKSVCDTDFWAK
SSTGAKNWVLCGSALSADEKYKLVKFASSCGATVTKAWNPDVTHVIAATDANGACSRTLK
VLMGILNGRWILSIDWIEACMQSKCPVDEEPYEIIFDNHGCCDGPKTGRLRVLDNAPKLF
SSLKFFFMAGFVETYKNDLQNLIVAAGGTILESEAQLQRSNDKPCHPSTTILVYNDDSTG
EVNGVVQRQLVVEKLALETGSQVIAHTWILDSIASGALQAFFQR
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatctcagacccatgctcatttcctcaatccatgggttcttcatcttcagaaa
ttagaacttgaattgaaatgctctctttgtttgaaggtgtataataagccgatcttgcta
ccttgtaaccacattttctgcagttcttgtgtacccaaatcgaatttgtttggtgggtta
gattgccccctctgcaaaatatcctattttgaacaagatttgaggcaagcgccttttgta
caaaatgtggtgaacatctataggagtatgaaggcatctactcatatgcttaatccagat
cttggaagagtcaaatctgaaattcccaatcaaatagccaagaaacagattgattgctct
ccacccggaaactcgaatagtgggacatgtgggaatgtggagcaacacgaggatgttgac
gtggatgtgaaccagatcgagtcttcatctcaggacagccctccatcctcaggaattagc
aagggtgtcgatgttgatagtcgtgatccaggaagcagctatgatactgcgggtaaactt
ccatccaagaagtcttccaagagaaatgctgatgattttaaaaccaaggataacagtcat
gatcaatctggcaagaagcaaaagcagtttctaagccaatgtctaccacagcttcgccag
ggtagtacatcatcactagctgccgatctgcaaaatgctgcttctgcaggttctgaaatg
gctaatactgggaatgatcctggaaaccaacaagcagttgaatctgattctgcaagttta
ataaacttcttttgtgcattctgtcagagttggaagataacagagggtagtggaccaatg
cagcattttgacaagggaaggcaagtttttggcagtgaggctggccgttcttccgtcttg
catgtgcatcaaagttgcatagaatgggcacctcaaatttattatgagaatgacactaca
atgaaaaatttggataaagaacttgccagagcaggaaaacttaagtgcaccagctgtggg
gtcaagggagctgcccttggctgttttgcaaaatcctgccggagaagttatcatgttcct
tgtgcgtatgaagttacaggatgcagatgggatatggatgattacctaatgctctgtcct
gctcatgtttccaacaaatttccgagtgagaagttcaaaaagcctgctgtaaaaaagtgt
tcgtcagcaaaaatagttgttgagaagaaaagcgtgtgtgacactgatttttgggctaaa
tcatctactggagccaagaattgggttctatgcggatctgccctttctgcggatgagaag
tataagctggtgaagtttgcaagctcatgtggagcaacagtgacaaaggcatggaaccca
gatgttactcatgtgattgcggcaacagatgcaaatggggcttgcagtagaacactgaaa
gttctcatgggcattcttaatggtagatggatacttagtattgattggattgaagcatgc
atgcaatcaaaatgtcctgtagacgaagaaccttatgagattatctttgacaatcatggc
tgctgtgatggccccaaaactggcagactcagggttttggataatgcaccgaagcttttc
agtagcttgaaattctttttcatggctgggtttgtggaaacatacaaaaatgacttgcaa
aatctgatagtagcagcaggaggtaccatccttgaaagtgaagcacaactgcaaagatct
aacgataaaccatgtcatccatcaacaacaatactagtttacaatgacgattcaacagga
gaagttaacggggtcgtacaacgacagttagtggtagagaaactggctttggaaactggt
tctcaagtaattgctcatacatggatcttggattccattgcttcaggcgcattacaggcc
ttttttcaaaggtaa
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