Spinacia oleracea (spinach): 110787128
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Entry
110787128 CDS
T05137
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110787128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110787128
Enzymes [BR:
soe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110787128
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
HECT type E3
110787128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
HEAT_2
Cwf_Cwc_15
TrAA12
Motif
Other DBs
NCBI-GeneID:
110787128
NCBI-ProteinID:
XP_021847391
UniProt:
A0A9R0JUA9
LinkDB
All DBs
Position
2:61127117..61143359
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AA seq
1600 aa
AA seq
DB search
MGDSLMESRGQKRVEMAEELPADKRACNSLEFKPSSSTVIPETLVSQTGTVFEMRVGDMV
TSSSSAASASASGHSEGDGERDSPYGSCDSDDREDGDGDGDGDGDDDDDDDDDDDDDRYS
SLRELQRSRSLSDSAKFDGIISCLSNDAEPSGQLAALTELCELLSFCTEESISSSIADKF
SSALVKLAKHENNPDIMLLAIRALTYLCDVFPRSPSFLVRHDAVPALCQRLMVIDYLDVA
EQCLQALEKISRDQPLACLQSGAIIAVLGYIDFFSTTVQRTALRTVVNICKKLPSECPSP
VMEAVPRLCILLQYEDQQLVELVANCLIKVGDCVKDSPGMLSELYGHGLINQVTRLIDLN
SRITLSQPTCTGLVGLVAKIASGSADAVRTLFELNIGRILKDVLLNSDVAHGTLRIKDND
CTQVHEVLKLLHGLLPEVARDKNEELLSSTEFLLLDQPDRLQEFGMDILPTLVQVVTSGA
NLYVCHGCLSVISRLIYISKPETLLKLFESINIASFLAGIFTRNDHHVLVLALQIAETVL
EKLHNILMQSFIKEGVLFAIDNLLMPDNCSKKNFPMISSSRNKKIAGKEVVRCLCYAYCT
TQSQSTSDSETCKANKDSVHSVAENLKMKFFTVEPHSSQSMVTDILQDLRNSAVLMNDLL
SISSNREAGAQSEERLCSILNKVILQLGGNAPVSTFELIESGIIKALLNYLSNGQLSCKS
CIPDDLTHAYGVQKRFEAFARISLSSPYPVSQDLPLSLLVRKLNSALSTVETMPVMAGYA
AKLRGSYATVPNGRSTVYPCLKVRFVRGEEELCLGDYLKDAVNVEPFCLLEEIEQYLRPK
VGQTIMGSSEASTKASFVVKNKPSQVPLDAASLSGKIVKHLESGSTCTVMPEMQEDGDDK
SHSSAMDIDLGHTSIVGAKVTTEEDQSISPKEEIPLPNVTENLIETSSTCLCGDDENSRK
SHFQASFNKENIPLKLALYLDGELLEYSSTLYQEILQRRMDGSKLWSSTYTITYRRVTGN
GTSSYKESRNLYDDGTVDRLFLCRQVMPLFSNVFTHGRDPKLDLSSTSSDILLLLRCLDV
MNRFSYHLVSYERINSFAEGRVQDFDEFKVALPTLPQYEFVSSRLTEKLEQQMRDPSTVH
VGAMPLWCSNLIARCPFLFSFEARCKFFQLAAFGKVQIPPNMSSHSDSNSSRDRRASAGS
PPRKKFLVCRERILESAAQMMGLFTQKKVVIEVEYSEEVGTGLGPTLEFYTLVSHEFQKT
GLGMWRGDYISATNSCSKQGSSMVSTSGLFPRPWSPTSSNINGIEFSDVIKKFVLLGQFV
GKSLQDGRVLDIPFSIAFYKLLLGKELSLCDIPLFEPELGRSLLEFKALVSRRKCESASG
DNMVHMDGDSLRFRLTKIEDLCLDFTLPGYPDYVLSSGMDDEMVNIDNLEEYISFVLDAT
IQTGVRRQVDAFKSGLNQVISDKHLQLFTEDELERLLCGERDSWLSSDLFDHIKFDHGYT
AGSPPIINLLEIISEITYEQRRAFLQFVTGAPRLPPGGLASLNPKLTVVRKHSSNSPDAD
LPSVMTCANYLKLPPYSSKEKMREKLLYAITEGQGSFHLS
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgggggatagtttaatggaaagtaggggtcagaaacgagtagaaatggcggaagagttg
cctgcagataagcgggcatgtaattctctggagtttaaaccgagttcatccactgtaatc
cctgaaacacttgttagtcagacgggtacagtgtttgagatgcgtgttggtgatatggtg
acttcatcttcatcagcagcttcagcttcagcttctggacattctgagggtgacggtgaa
agggattctccgtatgggtcttgcgattccgatgatagggaggatggtgatggtgatggt
gatggtgatggtgatgatgatgatgatgatgatgatgatgatgatgatgatcgatatagc
agtcttcgtgagcttcaacgtagtcgatcacttagtgatagcgctaaatttgatgggatt
atttcttgtttgagtaatgatgctgagccttcaggacaattagcagctttgactgaactc
tgtgaacttctttcattttgtactgaagaatcaatatcaagctcgatagccgataaattt
tcttctgctcttgtaaaattggcaaaacatgagaacaacccagacattatgcttttggct
atcagggctttaacttatttatgtgatgttttcccacgttcgccgagtttccttgtaagg
catgatgcagttcctgctttgtgtcagaggctcatggtcattgattaccttgatgttgct
gaacaatgcttacaagcattggagaaaatttctcgtgatcagccacttgcatgcctgcaa
tctggcgcgataattgctgttttaggttatatagatttcttttctaccacagtccagaga
actgcacttcgcactgttgtcaatatatgtaagaagctcccgtccgaatgcccttcacct
gtcatggaggctgttcctagattgtgtatacttctgcagtatgaagatcagcagcttgtg
gagcttgtagccaattgcctgatcaaagtaggagattgtgtgaaggactccccggggatg
ttgagtgagctttatggtcatgggctcattaatcaagtcacgcgtctcatagacttgaac
agccgaatcactttaagccaacctacatgcacgggtctagtcggtctagttgccaaaatt
gcatctggatcagctgatgctgtaagaactcttttcgagctcaacattggaagaattttg
aaggatgttctgttaaattctgacgttgctcatggaactcttcgtataaaagacaacgat
tgcactcaggtgcatgaagttctgaagttgctacatgggctgcttcctgaagtagccaga
gataaaaatgaagaactcttgtcaagcacagaatttttgttgttggatcagcctgataga
ctgcaggaatttgggatggatattcttcctactttagtgcaggtagttacctctggtgca
aatctatatgtctgtcatggatgcctttcagtgatcagtagattaatttatatcagcaaa
ccggagactcttctgaaattatttgagagtattaacattgcaagctttttggcaggcata
ttcactcgaaatgatcaccatgttttggtattggctctccaaattgctgaaacggtcctg
gaaaaacttcataatatcttgatgcagtcttttatcaaagaaggtgttctctttgcaatt
gataaccttctcatgccagataattgttcaaagaaaaatttccccatgatcagcagtagc
cgaaataaaaagattgctgggaaagaggttgtgcgctgtttgtgctatgcctattgtacc
acacagtcgcaatccacttcagattctgaaacatgcaaggctaacaaagattccgtgcat
agtgttgctgagaatctgaagatgaaattcttcactgtagagccgcatagttctcaaagc
atggtgactgatatacttcaggaccttaggaattctgctgtactaatgaatgatctgcta
agcatatcctcaaacagggaagcaggtgctcagagtgaagagagactctgcagtattttg
aataaagtcatacttcagcttggtggaaatgcacctgtttcaacattcgaactcatagaa
agtggtattataaaagcattactgaactacctatctaatggtcagctttcatgcaagtct
tgtattcccgatgacttaacacatgcttatggtgtacaaaaaagattcgaggccttcgca
agaatatctttgtcttctccttatccagtctcacaagatttgcctttgtctttgcttgtg
agaaagttaaacagtgccctgtcaactgtagaaactatgcctgttatggcaggttatgca
gccaagctgagaggctcttatgcaactgttcctaatgggcgctccactgtgtatccatgt
ctcaaagttcgctttgtgaggggagaagaggagttgtgcttgggtgactacttgaaggat
gctgtgaatgttgagcctttttgccttttggaggaaattgaacagtatctacggcccaaa
gtaggtcaaacaataatgggatcctcagaagctagtactaaagcgtcctttgtagtaaaa
aataaaccgagtcaagttcctcttgatgctgcctccctttcaggcaaaattgtaaaacat
ctggaatcagggagcacatgcactgttatgcctgaaatgcaggaagatggagatgataaa
tctcatagctcagctatggacatagatttggggcacacaagcattgttggagcaaaagta
acaactgaagaagatcaatctatatctccgaaagaggaaattcccttaccaaatgtaact
gaaaacttaatagaaactagctctacctgcctgtgtggtgatgatgaaaatagtaggaag
agccactttcaagcatccttcaacaaagagaatattccattaaagttggcgctttacctt
gatggagagctgttagaatattcatctaccttataccaagaaattcttcaaagacgaatg
gatggttcaaaattgtggagtagtacatacacaataacgtataggagggtaacaggtaat
gggacaagcagttataaggaatctaggaacttgtatgatgatggtactgtagatagactt
ttcctatgccggcaggttatgccactcttctccaacgtatttacccatggacgtgatcct
aaattggatttatcaagtacttcaagtgatatattgctgctcctcagatgtttggatgtg
atgaacaggttttcatatcatttggtatcttatgaaagaataaattcttttgctgagggt
agagtacaagattttgatgagtttaaagtggcacttcctacactgccgcagtatgagttt
gtgagcagcagattgacagaaaaattagaacaacagatgcgggatccttcaactgttcat
gttggtgccatgccattgtggtgtagtaatttgattgccaggtgcccatttttatttagc
tttgaggcaaggtgcaagttttttcagctagcagcatttggtaaagtgcaaatcccacct
aatatgtcatctcatagtgattcaaattcatctagagacaggagggcttctgctggtagt
ccacctcgtaagaagttcctggtatgtcgagaacgtatcttagagtcggctgctcaaatg
atgggcctttttacccaaaagaaagtagttattgaggtggaatacagcgaagaagttggt
acaggtctcggtccaacattggaattttacacattagtgagtcatgagtttcaaaagact
ggactgggcatgtggagaggtgattatatatcagctactaacagttgcagcaagcagggt
tccagtatggtatcaacttcaggactgtttcctcgcccttggtcaccaacatcaagcaac
ataaatgggatagagttttctgatgttattaagaagtttgttctgttggggcaatttgta
ggaaaatctcttcaggatggaagagttttggatattcctttttccatagcattttataaa
cttcttctagggaaggaactctctctatgtgatattccattgtttgagcctgagcttgga
agaagtttgctggagttcaaggctcttgtcagtagacgaaaatgtgaatctgcatctggg
gataatatggtgcatatggatggtgatagtctgaggttccggcttacgaagattgaagat
ctatgtcttgattttactctccctggttaccctgattacgtcctttcctctgggatggat
gatgaaatggtgaacatcgacaacttggaggagtatatttcttttgttttggatgctaca
atacaaactggagtgcgtagacaggtggacgcttttaaatcaggattgaatcaggttatt
tctgataagcatcttcaactttttactgaagacgagcttgagcgtttgctttgtggagaa
cgtgattcttggctttctagtgacctgtttgatcatatcaagtttgatcatggatatact
gctggcagtcctcctatcatcaatttattggagattatcagtgagatcacctatgagcaa
agacgtgcttttcttcagtttgtcactggtgcaccccggctaccccctggtggtttggct
tcccttaatccaaagctgacagtcgtgcgcaagcactcaagcaatagccctgatgcagac
ttgccaagtgtaatgacatgtgctaattatctgaagctaccgccatattcatccaaggag
aaaatgagagagaaacttctatatgccataacagaagggcaaggttcgttccatctatca
tag
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integrated database retrieval system
