Spinacia oleracea (spinach): 110787414
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Entry
110787414 CDS
T05137
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110787414
Transcription machinery [BR:
soe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110787414
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
110787414
NCBI-ProteinID:
XP_021847727
UniProt:
A0A9R0IEL9
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Position
1:121767914..121773117
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AA seq
548 aa
AA seq
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MGFGCKLNMMRCVLPSLRSPFTTNSSPPCSTSFRGKELDFGSARLSLLTIGFDESETLRK
DTLRPHAGSSSVPLTVENDYSNLETTISKRSCKDLISDTEVLSDRDVSVYVRSVQSCSAS
HFHTLMANINLLENKVSDSELLKLEKDILVQLGRLGALQLFHACLSRIIDMSDLPGLITE
DGKANVRKDNELKKKLVFSKRKEERKLRQERRLQASTSKRCACKSESSIESSIHHVVSTA
AKKTKARGRRAIIAKNEAEMSRGIKVVAQLEKVKLTLEKETGKAVSLNCWAEAAGIDEKV
LQHDLHFGWYCRDELLKSGRSLVLYLSRYYRGLGVAHEDLMQAGNIGILQGAERFDHTRG
YQFSTYVQYWIRKAMSQLVSRHGRGIKVPTTLSTTINRVQKARKILKRSQGKHPDDVEVS
KSTGLSLDKIKSADNCLRIVGSLDQKVGHFINMKYLECTPDTALEMPEKTVMKQHMRNDV
HKLLQELDPKERRVLIHRYGLEGHCMSLHEVGKVFDVSKEWIRKMEKRALTKLRTEQNQT
NLKHYLNL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggttttggctgcaaattgaatatgatgagatgtgttcttccttcacttcgttctcct
ttcaccaccaattcttcccctccttgttctacttcctttcgaggtaaagagcttgatttt
ggctcagcaaggctgtctcttttaacaattggcttcgatgagagtgaaacgttgcgtaaa
gacacattaagaccacatgcaggctcatcttcagttccactaactgttgagaatgactac
tcaaacttggagacaactatcagtaaaagatcttgcaaagatttgatcagcgatactgaa
gtattatctgatagagacgtctctgtatatgtccgaagtgtacaatcctgtagtgcttca
cattttcatactctaatggcaaacatcaatttacttgagaataaagtttctgattctgag
ttgttgaagcttgaaaaagatattcttgttcaattaggaaggttgggagcattgcagctg
tttcatgcatgtttgtctaggatcattgatatgtcagacttaccaggtctgatcactgaa
gatggcaaagcaaatgtcagaaaagataatgagttgaaaaaaaagttggttttttcgaag
agaaaggaagaaagaaaattaagacaagagaggaggttacaagctagtaccagtaaaaga
tgtgcttgtaaatcagaaagttccattgaaagttcaattcatcatgtagtttctactgcg
gcaaagaagaccaaggcgagaggcagaagagcaattattgccaaaaatgaagcagaaatg
tcgagggggataaaggtagttgcgcaattagaaaaggtgaaattaaccttggaaaaggaa
actggaaaggcagtgagtttaaattgctgggctgaagcagctggtattgatgaaaaggtg
ttgcagcatgatttgcactttggttggtattgcagggacgaacttcttaaaagtggtcgt
tccttggtgttgtacctttcgagatactatcgaggactaggagtcgcacatgaagactta
atgcaggcagggaacattggaatattgcaaggtgctgaaaggtttgaccacacaagggga
tatcaattctctacatacgttcagtactggatcagaaaagcaatgtctcagttggtgtca
cggcatggaagagggattaaagttcctacgacattgagcactacaataaaccgcgtacaa
aaggctcgaaagatccttaaaagaagtcagggaaaacacccagatgatgttgaagtttca
aagtctactggtctttccttggataaaattaaatctgctgacaattgcctaagaatcgtg
ggttcacttgatcagaaagttggacatttcataaatatgaaatatttggaatgcacacca
gatacagcgctagagatgcccgaaaaaacagtaatgaagcagcatatgagaaacgatgta
cataagcttctccaagaactcgatccaaaagagagacgggttttgattcatagatatggt
ttggaaggtcattgtatgtcacttcatgaggttggaaaggtttttgatgtaagcaaagaa
tggataagaaaaatggagaagagggctctcaccaagttaaggactgaacagaatcaaacc
aatttaaagcattatttgaatctctag
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