Spinacia oleracea (spinach): 110787425
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Entry
110787425 CDS
T05137
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110787425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110787425
Enzymes [BR:
soe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
110787425
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
110787425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
110787425
NCBI-ProteinID:
XP_021847740
UniProt:
A0A9R0JV61
LinkDB
All DBs
Position
1:121900961..121911714
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AA seq
811 aa
AA seq
DB search
MGGSEQQLNSISSTPPLPLKRHVINKPISLAGPTEVDLIRNAELGKFLIDSELYESNEEG
DKREEVLNRIREIVKGWVKQLTRQRGYTDQMVDDANALIYTFGSYRLGVHGPGADIDTLC
VGPSYVNRDEDFFIILHDILAETEEVTELQPVPDAHVPVMKFKFQGVSVDLLYASVSMLV
VPDDLDISDGSILHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVY
SNVTGFLGGVNWALLVARVCQLYPNATPSMLLSRFFRVYTQWRWPNPVMLCPIEEEDLGF
PVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFDHGNKICQEIELTKAQ
WSTLFEPYLFFESYKNYLQVDIVAEDAVDLLAWRGWVESRLRQLTLKIERDTNGMLQCHP
YPYEFVDTSKQCGHCAFFLGLQRKQGEKVKEGQQFDIRGTVDEFRQEVNMYMYWKPGMDI
YVSHVRRKQLPPYVFPEGYKRPRRHMSHQVEKMCGDAEGDTAVSADRPLKRRTDSKMGDM
TPSRLEKKASISPQRLETLSPEFTSRFYTPSPLSSTSDMLIHSQDTPSFLDGDRSMDSHN
VFLDKISHSTILLAKQDIKDSISALENEASIEEALPKDVSGQETLDICNRIKDACLVRKD
EETSSLQNCQTESFRRAKDLIERAAKDDIDEVMGHSEQTEGAENGIQFGSSADTQTLNHE
DDQHGADPDLHSDNGYLGGTGVFQGGSAEELESSTAAGMAIETRGRTTNSANLLRQRLTA
QNVRSIILSYDEALVYRSTADSVSSKNLLLD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggggggttctgagcagcagcttaatagtatttcatctactcctccgttgccattgaaa
aggcatgtaattaataagccgatttcgcttgcgggtcctaccgaggttgatcttatacga
aatgctgaattaggaaagtttttgattgattcggagctttatgagagcaacgaagaagga
gataagagagaggaggttcttaatcggattcgcgagattgtgaaagggtgggtaaagcag
ctgactcgccaaagaggatacacggatcaaatggtagatgatgcaaatgctctgatttat
acttttgggtcttatcgattaggggtgcatggacctggggctgacattgatactctgtgc
gttgggccttcctatgtaaaccgtgatgaagacttctttataatattgcatgacattctg
gctgaaactgaagaagtcactgagcttcagccagtccctgatgctcatgtccctgtaatg
aaattcaaatttcaaggagtatctgttgacctcctctatgcaagtgtttcaatgctggtt
gttcctgatgacttggacatatcagatggctccatacttcacaatgttgatgagccaaca
gtacgtagtctgaatggatgtcgagttgcagaccaaattcttaagctagttcctaatgtt
gagcacttccgaacaacactaagatgtctcaagttttgggcaaagcgacggggtgtctat
tcaaatgtgactggatttcttggtggtgtgaactgggctctattagttgccagagtatgc
caactatacccaaatgctactcctagcatgttactttctcgattttttagagtttataca
caatggcgttggccaaatcctgtgatgctctgtccaattgaagaggaggatcttggtttc
cctgtgtgggatcctcgtaaaaaccctcgggaccgcacccatcatatgccaattattact
cctgcatacccgtgcatgaactctagctacaatgtctcaacaagtacgctccgtgttatg
atggagcagtttgatcatggcaataaaatttgtcaggagattgagttgacaaaggcccaa
tggagtactctttttgagccatatcttttctttgagtcgtacaaaaattacttgcaagtt
gatattgttgcagaagatgcagttgatttgctggcttggagaggctgggtagaatctcgg
cttcgacagcttaccttgaagatagagagagacacaaatggcatgttgcagtgccatcct
tacccatatgagtttgtagacacatctaagcagtgtggccactgtgctttcttcttgggg
ttgcagaggaaacaaggcgagaaagttaaagaaggtcagcagtttgatattcgtggaact
gttgatgaatttaggcaggaagtcaatatgtatatgtattggaaacctggcatggatata
tatgtgtctcatgttcgtagaaagcagcttcctccatatgtttttcctgaaggctataaa
cgacctcgaagacacatgagccaccaggttgagaagatgtgtggtgatgctgaaggggat
accgctgtgtctgctgatagaccactcaagaggcggacggattctaagatgggggatatg
accccatcacgtcttgagaagaaggcatctatcagtccacaacggctggaaactctttca
ccagagttcacttctagattttacactccttcacctttgagctcaacctcagatatgctt
atccactcgcaagatacaccatcatttctggatggtgacagaagtatggactcacacaac
gtgtttctagacaagatcagtcatagtaccattttactggcgaagcaggatattaaggat
agtatttctgcgcttgaaaatgaagcaagtatagaggaggcacttccaaaggatgtctcc
ggtcaggagactcttgatatctgtaatcgaattaaggatgcttgtctggttagaaaggat
gaagaaacctctagccttcagaattgtcagactgaatctttccggagagcgaaggaccta
atagagagggctgcaaaggatgatattgatgaagtcatgggtcatagtgagcagaccgag
ggagctgaaaacgggatccaatttgggtcaagcgccgacactcagactctcaatcatgag
gatgatcaacacggggcagatcctgatttgcattcggataatggatatctgggcgggact
ggtgttttccagggtggatccgcggaagagctagagtcaagtactgcggctggcatggcc
atagaaactcgaggtagaactacaaattccgcaaacttgttgaggcagagattgacggca
cagaatgttagaagtatcatcctatcttatgatgaagcacttgtatatagaagtaccgca
gactcggtaagttccaaaaatttactgctggattaa
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