Spinacia oleracea (spinach): 110787461
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Entry
110787461 CDS
T05137
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110787461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110787461
03036 Chromosome and associated proteins [BR:
soe03036
]
110787461
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110787461
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110787461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
110787461
NCBI-ProteinID:
XP_021847775
UniProt:
A0A9R0IFK7
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Position
1:122418741..122429138
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AA seq
723 aa
AA seq
DB search
MPAPAAPNSDDQLSLFSPPPSSPKQPIIYPLHHSLSSPVSRIAISWSRGNTLRLSLLPQP
SSNGGIEVNDGDDSSGGSVVEVKLSAGNGGIDDDAQWRRIVYGSVAPFAMFQSRKNSAFS
FSKLPVGALSNVDWWEYVMEYSKEINSLLGTTKSMASSIVDDPRRILMVDEEPTSLKAAW
ELLEIFYADKQSQAWLPERLVDWLADYDSLFSETQFTVYSKLVDLQQRLLNMQTIEDDQK
YWDCLSSALALGWLDIVVKLLRLHGSYQLDQLSRRETENGLVEAVVVLVSKMPRLRPELQ
AGRLGECYKNKTDFIKGWETWRARVTKLECSGYWVQCGHQKTREGLRKILQIMLGNTEHL
SATTCHWVELYIAHFIYIRPFTVGFESLYSQAQKCIQLKPVSHPHSLMGLMVGILGENTE
VVLAECSRAFGPWMVTHAIELLTAGNDQSEILLHEVRQNLGGVSIEELHRLVYAQVLASN
QLTWQIAPVYLTSCRPGMGMLEILLYRQPVHLKQGLLKNLEICRLYELDTVSSNIMKIAG
VHHWKHGRKGSGIFWLQQAQDEIRLNKIAQQLFDFVGKSVSEESFKQWEGLIELLGSDTR
TAGGLEFLHKYRDFKRSLQQVVDGKATDAARQAVESLILLMKNPSTPQQFWLPLLHDSLK
LLTWREGPLLDVAQTNLLLNKLQELSMARMRPDYVEADLPTQALSTVRLALATNLGRAIL
EEQ
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgccggcggcaccaaattccgacgaccaattatctctcttctcaccacctcca
tcttctccaaaacaacccataatctaccctcttcaccattctctctcctccccagtttct
cgcatcgccattagctggtcccgcggcaacactcttcgactctctcttctccctcaaccc
tcctccaatggcggaatagaagtaaatgatggtgatgattcttccggtggtagtgtggtg
gaggtgaagctatccgccggcaatggcggaattgacgatgatgcgcagtggaggaggatc
gtatatggctccgttgctccttttgcgatgtttcagagccgaaagaattcggctttctct
ttttccaagcttccggttggagctttatccaatgttgattggtgggagtatgtcatggag
tacagcaaggagataaactcacttctcggtacaacaaagtcaatggctagttcaattgtt
gatgacccaagaagaattctgatggtagatgaggagccaacaagtttaaaagctgcatgg
gagctattggaaattttttatgcagacaaacagtctcaagcttggctacctgaacgtctt
gtggattggctagctgactatgatagcctattttctgaaactcagtttacggtgtactca
aaacttgtggatttgcagcaacgtcttttgaacatgcagacgattgaggatgatcaaaag
tactgggattgtttatcgtcagcgctagctcttggctggttggatattgtggttaaattg
ttgcgtctacatgggtcttatcaacttgatcagcttagcaggcgtgagacagagaatggg
cttgtggaagcagtagttgttcttgtttcaaaaatgccacgtctacgtcctgaactacaa
gctggaagattgggggaatgctataaaaataagactgacttcatcaagggttgggaaaca
tggcgtgcacgagttactaagctggagtgtagtggttactgggttcagtgcggccaccag
aaaaccagggagggtttgagaaaaattctacagattatgctgggaaacactgaacatctt
tctgctacaacatgtcattgggttgaactttacatagctcactttatatacatcaggccc
ttcacagtggggttcgaaagtttgtacagccaagctcagaaatgcatccagctgaagcct
gtatctcatcctcatagcttgatgggacttatggttggaattcttggagaaaatactgag
gttgtcttagcagaatgctctagagcttttggcccatggatggtgacccatgccattgag
ttgttgactgctggaaatgatcagtcagaaattcttttgcatgaagtgcgccagaatcta
ggaggagttagtattgaggagctccatcgacttgtttatgctcaagttcttgcctctaat
caattaacatggcagattgctccagtatatttgacatcttgcaggccgggaatgggaatg
ttagagattttactgtacaggcaacctgtacacttaaagcaaggattgctcaaaaaccta
gagatctgccgtttgtatgaacttgatactgtcagttcaaacatcatgaagattgctggt
gtacatcactggaagcatggtcgaaagggttctggtatcttttggcttcaacaagctcag
gatgaaattcgtctcaataaaattgctcaacagctgtttgattttgttgggaaatcagta
tctgaagagagcttcaagcaatgggaaggattgattgaattattaggctctgacacaaga
actgctgggggtctagagtttctgcacaagtacagagatttcaaaagatccctgcagcaa
gttgttgatgggaaggctactgatgctgcaaggcaagctgtggaatccctcattctgctc
atgaagaacccatctacgcctcagcaattctggttacctcttcttcatgactcgttgaag
ctactcacatggcgggagggtccccttcttgatgtcgcacagaccaacctattactgaat
aagctccaagagttgtccatggcaaggatgcgccctgattatgttgaagctgacttgcca
acccaagccttgagtactgtccggttggctcttgctacaaatcttgggcgtgctattctt
gaagaacagtga
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