KEGG   Spinacia oleracea (spinach): 110787530
Entry
110787530         CDS       T05137                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03020  RNA polymerase
soe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110787530
  09124 Replication and repair
   03420 Nucleotide excision repair
    110787530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soe03021]
    110787530
   03400 DNA repair and recombination proteins [BR:soe03400]
    110787530
Transcription machinery [BR:soe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110787530
DNA repair and recombination proteins [BR:soe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110787530
SSDB
Motif
Pfam: RNA_pol_Rpb4 DUF5884
Other DBs
NCBI-GeneID: 110787530
NCBI-ProteinID: XP_021847855
UniProt: A0A9R0JUR8
LinkDB
Position
6:129351743..129352553
AA seq 138 aa
MSGEEEENASELKLGEDFVKAKCLMNGEVAMILEHRLEQLQQVSDDPLNQMPQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRHELAEFELSVLGNLCPETVEEAIAMVPSLKDKGRDLD
DEAIEKMLTDLALVKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtcaggcgaagaagaagagaacgcatccgagttaaaactgggcgaagatttcgtgaag
gcaaagtgtttgatgaacggagaagtagccatgattcttgaacacaggttagagcaattg
caacaagtttctgatgatccactaaatcaaatgcctcaagttttcgagaaatctctgcaa
tatgtcaagcgattcagccgttacaagaacccagatgctgtgagacaggttagggaaatc
cttagccgccatgaattagccgaattcgagctttcagttcttggtaatctttgccctgaa
actgttgaggaagccattgctatggtgccgtcccttaaggataaaggaagagatcttgat
gatgaagcaattgaaaagatgcttactgatcttgctcttgtgaagaagtttgagtaa

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