Spinacia oleracea (spinach): 110787612
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Entry
110787612 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110787612
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soe03016
]
110787612
Enzymes [BR:
soe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
110787612
Transfer RNA biogenesis [BR:
soe03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
110787612
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
110787612
NCBI-ProteinID:
XP_021847929
UniProt:
A0A9R0JUW5
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Position
2:complement(96848238..96858026)
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AA seq
616 aa
AA seq
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MEDIEDLLAGDGGVAPGFRLPVTSVGLNPKKKPMKSNLSVVQHPLQSIRIPGTQTIYIKT
FGCSHNQSDSEYMAGQLSAYGYTLTDFPEEADLWLINTCTVKAPSQSAMDTLISKGKGAN
KPLVVAGCVPQGSRNIKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLP
KVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVQRVKTVIADGVREIWLSS
EDTGAYGRDVGVNLPILLNAMIAELPSTGSTMLRVGMTNPPYILEHLKEIAEVLCHPSVY
SFLHVPVQSGSNAVLTGMKREYTVEEFRIVVDTLTKLVPGMQIATDIICGFPGETDDDFS
QTVELIKEYKFAQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELTAVFESFTPYNGMEG
LVERIWITDIAADGTHLVGHTKGYIQVLVNAPESLLGSSATVRITSVGRWSVFGEVIQVL
SYNAQDRTLNKDELSCSRFSPSGVSDESCACSKDPDSCCSAAKCADTSEVPINSNQGKDD
QNFDGPWKRNSLTFKASENTKFQEPNPEEQSGKARARASMAQWNIIDKSLVAGIFLSFLI
AVACFSQLWARKVMSS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatcgaagatttattggcaggagatggtggcgttgcacctgggtttcgattg
cccgttacttctgttgggttaaaccctaagaaaaaacccatgaaatctaacctttctgta
gttcaacacccacttcaatccatcagaattcccggcacccagacaatttatattaaaact
tttgggtgctctcataatcagagtgacagtgagtacatggctgggcagctgtcagcctat
ggatataccttaactgactttcccgaggaggcagacttgtggctgataaatacgtgcact
gtcaaagcacctagtcaatctgccatggatactctcatttcaaaaggtaaaggtgcgaac
aaacccctggtcgtggcagggtgtgtcccgcaaggaagtcggaacataaaagagcttgaa
ggagttagtatagttggtgtgcagcaaattgatcgtgtcgtagaagttgtagaagagacc
ttgaaaggccacgaggtgcggcttttaaataggaaaacattgcctgctcttgatctccca
aaggtgaggaagaacaagtttgttgagattcttcctattaacgttggttgtttaggtgct
tgtacttattgcaagacaaagcatgcacgtggtcatttaggaagctatacagtggacagc
cttgttcagcgtgtgaaaactgtcatagcagatggagttagggagatatggttgagcagt
gaagatactggagcatatggccgtgatgttggagttaatcttcctattcttttgaacgcg
atgattgcggagctcccctccactggaagtacaatgcttcgtgttgggatgactaatccc
ccttatatacttgaacacctgaaagaaatagctgaagtattgtgccatccttctgtgtac
tcctttcttcacgttcctgttcaatctgggagcaatgctgtcttaactggcatgaaacgt
gaatacactgtagaagagttcaggattgtggtggatacgttgaccaaactggtacctggg
atgcagattgcaacagatataatatgtggttttcctggtgaaactgatgacgatttttct
cagactgttgagcttatcaaggagtataaattcgctcaagttcatatttcacaattctat
cctcggcctggtactcctgctgcaaggatgaagaaggttccaagtgctatcgtaaagaag
cgaagccgtgaattaactgctgtttttgaatccttcaccccatataatggaatggaaggg
ctagttgagaggatatggataacagatattgctgctgatggaactcacttggtgggacac
accaaaggatacatacaggtattggtcaatgctccagaaagccttctgggttcatcagct
actgtaaggatcacttctgttggaagatggtcagttttcggtgaagtgatccaggttcta
agttataatgctcaagatagaactttgaataaggatgaattgagttgcagtagattttct
ccaagtggtgttagcgatgaatcttgtgcgtgctctaaagatccagattcatgttgtagt
gcagcaaagtgtgctgatacttcagaagttcccatcaatagcaaccaaggaaaagatgat
caaaactttgacggaccgtggaagcggaatagccttacatttaaggcctcggagaataca
aaatttcaggaacctaatccagaggaacaatccggcaaagcaagagcaagagcaagcatg
gcgcagtggaatattatcgataaatctcttgttgctggtatttttcttagttttttaatc
gctgtagcttgcttttctcaactatgggcaaggaaggtgatgtctagttaa
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