KEGG   Spinacia oleracea (spinach): 110787618
Entry
110787618         CDS       T05137                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase FANCM isoform X1
  KO
K10896  fanconi anemia group M protein
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    110787618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:soe03400]
    110787618
DNA repair and recombination proteins [BR:soe03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     110787618
SSDB
Motif
Pfam: Helicase_C DEAD ResIII Cas3-like_C_2 Spt5_N Nop14
Other DBs
NCBI-GeneID: 110787618
NCBI-ProteinID: XP_021847937
UniProt: A0A9R0IF22
LinkDB
Position
2:96964228..96978596
AA seq 1344 aa
MDSSSVQLIQDDEEDFDWEAAVREIDVACLSTAAKTLETPPPPPPPPPFEAAVEGNKLWK
NQQLNKFQNNCRQSTLDKFISSGSSKPSTDNEIKVCGEDEQNRVQERACYVDIDPEAAKT
WIYPDNVSRREYQLSIAKTALFSNTLVALPTGLGKTLIAAVVMFNYFRWFPEGKIVFAAP
SRPLVMQQIEACHNIVGIPQEWAIDMTGLTSPPKRASLWKSKRVFFVTPQVLEKDIQSGA
CLVKYLVCLVIDEAHRAMGNYSYCVAVRELLAVPVEMRILALTATPGSKKETIQQVIDNL
QISTLEYRNDSDVDVCPYVHNRTLELIEVPMGKDADEIHNLLLEVIRPLAARLCAMGVLP
GRDPQTLSPCDLLNSRDRFRQAPPPDLSHVKCSEVEGYFGVLITLYHIRKLLSSHGIRPA
HEMLEEKLRQGYFARLMSRNEAIQRTKLLMQKSLSHGAPSPKLSKMIEILVDHFTANDPA
NSRVIIFSNFRGSVRDILDSLAHVGSVKATQFIGQSSGKTLKGQSQKVQQAVLEKFRMGG
YNVIVATSIGEEGLDIMEVDLVICFDANISPLRMIQRMGRTGRKHDGRVVVLACEGTEIK
GYKRKQATGKTVGKHMQNGGMNSFNFHCSPRMIPHLLKPELQFVELSIEKFIRPAKKVKV
DSPQQPEFRERLVDAEAALLGKYFLSNEAIKPSLVAFPYFQTCPSRVHRVMHSSRTGWLI
DAMQLLRGLPSNTGGNFSLDYPRSTQCLLNGSVEKDTENAIDVLDPANVSATQSKLSNFE
VSPSETLVAEEKHMLHSPDKVMEVLVPLPAILPSDKHTMLNSSVQDVCEVHSGGRSQLPA
DWEMFDVAVGDAIIVHTPPFDDNCPNDSFSRETADAIEPKSPATPAAQRDLDVADSDFSP
RLTSLIESGVVPESPLSNAGDGYKKDGDIVDWQSNEEKDENLVPEQILSPKYFGNSLIIA
SKEVNATSCPQTREVRPPVGNETSSRSPNGLFKTESTSMPSSSPEFRTPLRNLTNSSCDE
DWRMSSGKMSGSNERPFRLKRLRRIGDFVKEKKQGSAKEKPISTSTEAAFEDTVVLHKAI
KHGKVKKPFEDARDFIDEEAEVSSEDVVPDSEDEVNYEDSDAYEESFIDDQSDQAVGSGQ
TEDTKTDMMAIYRRSLLTQSPYQPPKKSSVVTPESLTSVTTMTEGGESFGKSCTLQTQGC
LKSPNLSIRNSVDSRLNMVACEAIPSSSSNALVNVVTTQSLKRKMISSRAFTLPAKNLEK
EFYSDSALPSKEASISCQGNVVGSGCTLSDDQFYEGLDLDELEAQAAKLLSQRTGSSVQG
KKTSEPPPQNTTLLGVPSFDLGIS
NT seq 4035 nt   +upstreamnt  +downstreamnt
atggattcttcttctgtccagttaatccaagacgatgaagaggacttcgattgggaagca
gcagttcgagaaatcgatgttgcttgcctgagcaccgccgctaaaaccctagaaacgccg
cctcctcctcctcctcctcctccatttgaggccgctgtggaaggcaataagttatggaag
aatcagcagttgaacaagttccagaataattgccgtcagtcgacgctcgataaatttatt
agttccgggtcctcaaaaccgtcaacggataatgaaattaaagtttgcggcgaagatgag
caaaatagggttcaggaaagagcgtgctatgttgatattgatcccgaggctgctaaaact
tggatttaccctgataatgtatctcgtcgtgaatatcagctttctatagctaagacagct
ttattttcaaacacattggtggcactgcctacaggactgggaaaaactctcatagctgct
gttgttatgttcaactattttagatggttccctgaaggcaagatagtttttgctgctcct
tcgagacctttggtcatgcaacaaatagaagcctgtcataatattgttggtataccacaa
gaatgggcaattgatatgacaggtctaacaagtccacccaaacgagcatccttgtggaaa
tcaaaacgagtattctttgtcacaccacaagttcttgagaaagatattcaatcaggggct
tgcctagtgaaatatttggtgtgcctagtaatcgacgaggctcatcgtgcaatggggaac
tactcttactgtgtggctgttcgcgagttgttggcagttcctgtcgagatgagaatatta
gcgttgactgctactcctgggtcgaagaaggaaacaattcagcaggtaattgataacttg
caaatatcgacgcttgaatatcgcaatgacagtgatgttgatgtttgcccttatgtacac
aacaggacgcttgaactaatagaggttccaatgggaaaagatgctgatgagatacataat
cttctcttggaggttatacggccacttgctgccaggctttgtgcaatgggagttctacca
ggcagggacccccaaacattgagcccttgcgatttgctgaattcaagggatagatttcgt
caagcaccaccaccagatctttcccatgtgaagtgtagtgaagtggaaggttactttggt
gttcttattacactctaccacatacgcaagcttctctctagccatggcataagaccagcg
cacgagatgcttgaagaaaagttgcgacaagggtattttgcaagacttatgagtagaaat
gaagccatacagagaacaaagctcctaatgcagaaaagtttgtcgcatggtgcccccagc
ccaaaactgtccaaaatgatagaaattttagtagatcatttcacagcaaatgatccagca
aactcaagggtaatcattttttcaaattttaggggaagtgtcagggacatattggattca
ttagcccatgttggttcagttaaagcgactcagtttattggtcaaagctcagggaaaaca
ttaaaaggccagtcacaaaaggttcaacaggcagtcctcgagaaatttcgcatgggtgga
tacaatgttattgttgccacatcaattggtgaagaaggacttgatattatggaagtggat
cttgtgatatgttttgatgctaatatatctcctttgaggatgattcagcggatgggaaga
actggaaggaaacatgacggtcgagttgttgttttagcgtgcgagggcactgagataaaa
ggttataagcggaagcaagcaacaggtaagactgtggggaagcacatgcaaaatgggggc
atgaatagtttcaattttcattgcagcccaaggatgattcctcaccttttgaaaccagag
ctgcaatttgttgaactatcaattgaaaaatttattcgtccggctaaaaaggttaaagtt
gattctccacaacaaccggagttcagggaaaggctcgttgatgctgaagctgcactttta
gggaagtactttttgtccaatgaggcaataaaaccatctcttgttgctttcccttatttc
cagacatgtccctccagggtgcacagagtaatgcactcatctcgaactggatggctcatt
gatgcaatgcagcttctgcgagggttgccatccaatactggtggaaatttttcgcttgat
tatccgaggagtactcagtgcttattaaatgggagtgttgaaaaagatactgaaaatgca
atagatgtacttgatcctgcaaatgtttctgctacacagagtaaattatccaactttgag
gtctccccatctgaaactttagtggctgaggagaagcacatgctccattctcctgataaa
gtaatggaagttttggttcctctcccagctattttgccatctgacaaacatacaatgctg
aattcttccgttcaagatgtatgtgaagttcactcaggagggagatctcagttaccagcc
gactgggagatgtttgacgtggctgtaggtgatgcaattattgttcacacgccacctttt
gacgacaactgtccaaatgatagttttagccgtgagactgcagatgcaatagagcccaag
tccccagcaacaccagctgcacaacgtgacctagatgttgcagattctgatttcagtcct
cgtttaactagtttaatcgaaagtggtgttgtaccagaatctcctctgagtaatgctggt
gatggatataagaaagatggcgatattgtagactggcaaagtaatgaagagaaagatgaa
aatcttgttcctgaacagatattatctcccaaatattttggaaattcgttaattattgct
agtaaagaggtcaatgctacctcttgccctcagacaagagaagtcagacctcctgtcgga
aatgaaacgtcatcgaggtcacccaacggtctctttaaaacagaaagcacctctatgccc
tcatcttccccagaatttcgaactcctttgcggaatttaacaaatagcagctgtgatgaa
gattggcgaatgagttctggtaaaatgtctggatccaatgaacgtccgtttagattgaaa
aggttacgcaggattggggactttgtcaaagagaagaaacaaggcagtgcaaaagagaag
ccaattagcacttctacagaagctgcatttgaagacactgttgtacttcataaggctatc
aagcatggcaaagtgaaaaaaccatttgaagatgccagagatttcattgatgaagaagct
gaggtttcctcagaagatgtggtaccagattcagaagatgaggttaattatgaggatagt
gatgcttatgaagagagttttatagatgaccaatctgatcaagcagttggtagtggtcaa
acagaagatactaaaacggatatgatggcaatttacaggcgttccctactcacccaatca
ccgtatcaaccaccaaaaaagtctagtgtagttactccagagtctctgacttctgtaacc
acaatgaccgaaggtggagaatcttttgggaaatcttgcactctacaaactcaaggttgc
ttgaaatctccgaatctatcaataagaaactcagtagattctcgcttgaatatggtagca
tgtgaagcaataccaagcagcagtagcaatgctctggtaaatgtggtcactactcaaagt
ttgaaaagaaaaatgatctcaagcagagcttttactcttcctgcaaagaacctggagaaa
gaattctactctgattctgcacttccaagcaaagaagcatcaatatcatgtcaaggcaat
gttgttggttcaggctgtactctttcggatgatcaattttatgaaggtcttgatcttgat
gaattggaggcccaagcagcaaaacttcttagtcaaagaacagggtcttctgtgcaaggg
aaaaaaacctctgaacccccgccacagaacaccactcttttgggcgttccatcatttgat
ctcggaatctcatga

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