KEGG   Spinacia oleracea (spinach): 110787784
Entry
110787784         CDS       T05137                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110787784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:soe03400]
    110787784
DNA repair and recombination proteins [BR:soe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     110787784
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 SEN1_N
Other DBs
NCBI-GeneID: 110787784
NCBI-ProteinID: XP_021848120
UniProt: A0A9R0IFB9
LinkDB
Position
4:complement(171418681..171424220)
AA seq 395 aa
MSSSNASPNSGTAKNPKRALPSWMSARDGGSGDKQGNDRMDDDSLQKKVRGRGKGVKDSG
EENSSSAGPKKSEFSNLLEGVVFVLSGFVNPERGILRSQALEMGAEYQQDWNSNCTLLVC
AFRNTPKFRQVEADGGTIVSKDWFIECYTQKKLVDIETYLMHVGKPWRKSNITHTGNQVF
EKSQHNISRNQEVKQREVEPKASSSPKLQELRSNASKYLGDKFAAYKVKKWAVDDLNRTI
TWLESQEEKPEPNEIRSVAAEGVLTCLEDAIDLLEKEEDLRHLTEQWNMVPRVVEELVEM
QSAESSSTISKDDLHKQALACKKIYEGELKKMPEGSNKKNREPNSNSRNIGKGKNVVSAD
NRTSNSMDYESDETIEMTEDEINDAYNSIASKLPR
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgtcatcttcaaatgcaagtcccaattctgggactgctaagaatccgaagcgagcctta
ccttcttggatgagtgcaagagacggtggaagtggtgataaacaaggtaatgatagaatg
gatgatgacagtttgcagaaaaaagtgagagggcgaggtaaaggagtgaaagatagtggt
gaagagaattcctcttcagccggtccaaagaaatcggagttctccaatctcttggaaggg
gtagtttttgttctgtcaggctttgtaaaccccgagcgaggtatattgcggtcacaggct
ttagaaatgggggcagaatatcagcaggattggaattcaaattgcactcttttggtttgt
gcatttcggaataccccgaagtttcgacaagttgaagcagatggtggaacaattgtttca
aaggactggtttatagaatgctacacccagaagaagcttgttgacattgaaacttatctt
atgcatgttggtaaaccttggaggaaaagcaacatcactcatacagggaaccaagttttt
gaaaaatcccaacataatatatctcgcaatcaggaagtgaaacaacgtgaagtcgagcct
aaagcttccagttcaccaaagttgcaggaattgagaagcaatgcgtccaaatatcttgga
gacaaatttgctgcttacaaggtgaagaaatgggcagttgatgatttgaatagaactatc
acgtggcttgaaagtcaggaagagaagcctgagcccaatgagataaggagtgtagctgct
gaaggggttttgacctgtttggaggatgccatagacttgcttgaaaaagaggaggattta
cgtcatttgactgaacaatggaacatggtccctcgggtggtggaagaattggtagaaatg
caaagtgctgaaagttcttccacaatttcgaaggatgatcttcacaagcaggctcttgcg
tgtaagaagatctatgagggtgaactgaagaagatgcctgaaggttcaaacaagaagaac
agagaaccaaattctaacagtcgtaacataggaaaaggtaaaaatgtcgtctcagctgat
aacagaactagtaattcaatggattatgagagtgatgaaaccattgaaatgacagaagat
gaaataaatgatgcttacaatagtatagcttcaaaactacctagatga

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