Spinacia oleracea (spinach): 110787929
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Entry
110787929 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110787929
KO
K19022
AP-5 complex subunit beta-1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
110787929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110787929
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
110787929
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
110787929
NCBI-ProteinID:
XP_021848253
UniProt:
A0A9R0IFW4
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All DBs
Position
2:98243926..98252482
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AA seq
1126 aa
AA seq
DB search
MEKLPSKKTHLTLPEWESLIDDFHNGGSHRWWSSITPLSLLDFSLSSLLKKDFPLSLKLH
LLIFLDEFADQIFVSDDDYDEEEVLTRLIETLKVVIQSPIDGFSITYSLKEQILVSVTSI
TMTICELRVRVCQSQLEGLVAILLTIVNRPNHSIDRQTRAVACECLRELEREYPCFLAEI
VGHLWGLCQNERTHASQSYILLLLEVIHDIVVCKLNVASVFKTAVPLVPFNVPQWVTADG
GEGNVEEGMHFGVELSSSNAKELKRVMSFLLDCSQVLTPCGMVEFMSMVIPLAVGLELQS
SLLKVQFSGLLYSYNPLLWHVVLMLCRQFLDSFDGQEGEIFKRLVLISKEGQQPLVFRLL
VLHWLLGFVELVSEKDVVKRRLIVGMSSHFYPNVYDALALKSMKLDLIAFCSIVIDSEVS
QYGFSGKSVMKYFEDGLVCVAGFKWLPPWSTETAVAFRTLHKFLIGASTHSNADPSASKA
VMESTIFRGIQTILVNLLLDFQKLVPVVVALIDRLLNCQKHCCMGEKLLQTVDEHLLSKV
IINYRMSSYFLIFDRIGKNDSVPPQRLLDLLMKFTIFHVEKHSPDTGLKSWSHGSKVLGI
CRTMLLHHHSSRLFIGLSRLLAFTSLYFPDLEVRDNARIYLRMLICIPGKKLKHMLTLGD
QVIGISPSPHANSVYNVHSPRFSEDLKKSRSISSYIHLERVIPLLVKQSWSLCLPTIDYE
VDKNGFVDGINNSEPQLNVQGSSGNKTTQFVGDNKRIDQPQEPLRVMDSKISGIVDILRK
HFSCIPDFRHMSGIKIRIPCSLRFSSEHFNRIWGSDSTGDSAVELDTVPAMYGIVLKFSS
SAPYGSIPSYHIPFLLGESAFEIPHKKESLDIVSAGIQSNEKSVSSSLVTIELEPREPVP
GLVDVSINANAENGQVVNGKLQGVSVGIEDMFLKAAAPAEILEDTVPGYYSALFDALWEV
CGASSSAGRETFSLKGGKGFAAIHGTQSVKLLEVPSTLAIRVVERYLAPFVVGVIGRPLV
EVVKDGGLIQDVAWIDMFSGSANENNSVANFDGGPLYLTYFENEDGKINIGKTNMGCFLV
LIFLPPRYHLLFRMEVSDISTLVRIRTDHWPCLAYIDDYLEALFSL
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctcccttccaagaaaacccaccttacacttccagaatgggagtctctcatc
gacgactttcacaatggcggttctcatcgatggtggtcttcaatcactccactctctctc
ctcgacttttctctctcctccctcctcaagaaggatttccctctctccctcaaactccac
cttctcatcttcctcgacgaattcgccgatcaaatttttgtatctgatgatgattatgac
gaagaagaggttcttaccagattgattgaaacccttaaagttgtaattcaatccccaatt
gatggattttcgattacttactcgcttaaggagcagattcttgtttctgttacttcgatt
acgatgacaatttgtgagcttagggttagggtttgtcagtcacagcttgaggggctggtt
gcgattttattgacgattgttaatcggccgaaccacagtattgaccggcagacaagggcg
gtggcgtgtgagtgtttaagggagttggagagagaatatccgtgttttttggccgagatt
gtggggcacttgtgggggctttgtcagaatgagcgaactcatgcttctcagagctatatt
ctattgcttctagaggtaattcatgacattgttgtttgtaagttgaatgttgcttctgtt
tttaagactgctgttcctttagtaccttttaatgttccgcaatgggtgacggctgatggt
ggggagggtaatgtggaggagggtatgcattttggggtcgagttgtcgagctcaaatgca
aaggagttgaagcgcgtgatgtcgtttttgctggattgttcacaggttcttactccatgt
gggatggtggagtttatgtctatggtgatacctttggctgttggtttggagcttcaaagc
tctttgttgaaagttcagttctctgggttgctttatagttataatcctttgctttggcat
gttgttttgatgctttgtaggcagtttttggattcatttgatgggcaggagggtgagatt
tttaagcgcttggtgctgatctccaaggaaggacagcagcctctggtgtttcggttgctg
gttcttcattggttgttaggttttgttgaattggtttctgaaaaggatgttgtgaaaagg
aggttaattgtcgggatgagctcacatttctacccgaatgtatatgatgcacttgcattg
aaatcaatgaagctagatttgattgcattttgttctatcgtcattgattcggaagtgagc
cagtatgggttttcagggaaatctgtgatgaagtactttgaggacggtcttgtctgtgtt
gcaggatttaagtggctgccaccttggagtacggagacagcagtcgctttcaggaccttg
cataaattcttgataggtgcatcaactcattccaatgccgatccatctgccagcaaagct
gttatggagtctaccatcttccgtggtatacagacaatattggtgaacttgctgttggac
tttcagaagttggtacctgttgttgttgctttaatagatcgattattgaactgtcaaaag
cactgctgcatgggggagaagctgcttcagaccgttgatgagcatctactttctaaagtt
atcataaactatagaatgtcttcttattttctgatttttgatagaattggaaagaatgat
tctgtacctcctcaaagattgctggatttgcttatgaagttcacaatttttcatgttgag
aagcacagtccagatactgggttaaagtcctggtctcacggaagcaaagttcttggcatt
tgtcgaacaatgcttttgcaccatcatagttcccgcttgttcattggactctctcgactt
cttgcatttacatctctttattttcctgatctggaggttcgtgacaatgcaaggatttac
ctacgaatgttgatatgcatacccggaaaaaaactcaagcatatgctgacccttggggat
caagtgattggcatttcaccatcacctcatgcaaattcagtctataatgtccactctcct
cggttttctgaagatcttaagaaatccagaagtatttcatcttacatccatctagagcgg
gtgataccactgcttgtgaagcaatcttggtcattgtgtttaccaactattgattatgag
gttgacaagaacggctttgttgatggcataaataacagtgaaccacagttgaatgttcaa
ggttccagtggcaataaaactacccagtttgtcggtgacaataaaagaatagatcagcct
caagaacccctacgagtaatggattccaaaatttcagggattgtggatatattgaggaag
cacttttcgtgtattcctgatttcaggcacatgtcagggatcaagattagaataccctgt
tctttgaggtttagttctgaacatttcaaccgtatatggggatcagattcaacaggggat
agtgctgttgaattagatacagttcctgcaatgtatggaatagttctcaagttctcatcc
tcagctccatatggttctataccatcatatcatatcccatttcttcttggcgaatcggct
tttgagatcccccacaagaaagagtcattggacattgtctcagctggaattcagtccaat
gaaaagtcagtttctagttcacttgttaccattgaattggaaccccgagaacctgtgcca
ggtcttgtggatgtttccattaacgcgaatgcagaaaatggtcaggttgttaatgggaag
cttcagggggtctcagttggcatcgaggacatgtttctcaaggctgctgccccagctgag
attctagaagacacagttccaggatattactccgccctttttgatgctttgtgggaggta
tgtggtgcctcttccagtgcaggtcgggaaacattttcactaaaaggaggtaaggggttt
gcagcaatccatggaacacaatcagttaagcttctcgaagttccttcaaccttagcaatt
cgtgttgttgaaagatatttagccccctttgttgttggtgtgattggtagacctctggtg
gaggttgtgaaggacggtggcttaatccaggatgtggcatggatagatatgttttcaggt
tctgctaatgagaataactcggttgcgaattttgatggtggtccactatatttgacatac
tttgaaaatgaagatggtaagatcaacattggtaagacaaacatgggttgctttcttgtg
ttgatattcctaccacccaggtatcatcttctctttcggatggaagtttctgatatttca
acattggtccgaattagaacagatcactggccttgtttagcctacattgatgattatttg
gaagctcttttttctttgtaa
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