Spinacia oleracea (spinach): 110788288
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Entry
110788288 CDS
T05137
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110788288
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
90S particles
Other 90S particles
110788288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Ge1_WD40
VPS8_N
Motif
Other DBs
NCBI-GeneID:
110788288
NCBI-ProteinID:
XP_021848614
UniProt:
A0A9R0II86
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Position
6:128161386..128171799
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AA seq
529 aa
AA seq
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MKGKNPKRKPSSMYSSKSKKNYANQDSLNNSKRRRKFDSSDEEEENGFDAEISSDRSDGG
DDFFVDENGRDKSEDELEKETVEERRKRLAWDLVEKVRKGEEEQRKEDEEEDSDDDDREE
REGNRDSLVVKILQQEQLEESGRTRRLIASQLQKLGDKEEAEFLLKHRQSVTAVALSDDD
RRGFSASKDGCISQWDVEIRKAEKYLWPTEEVLKSHGVRDPQGKSNKKGKVIKHSKHTLA
LAVSSDGRYLATSGLDRHVHLWDTRTREHIQAFTGHRGPVSCLTFRQGTSELFSGSFDRT
VRIWNAEDRAYINTLFGHQSEVLTIDCMRKERVLTVGRDRTMQLYKVPEESRLVYRSSTS
ALECCCLAGNDEFLSGSDDGSIELWSVLRKKPVSIVKNAHTLSALKKQVDLNYNGTMSNG
HIESSEIKANNPSSSAQSWVGSVTVCRNSDLAASGAGDGCVRLWQINSETKAISPLFDVP
LVGYVNSLAIAKSGRFLVAGVGQEPRLGRWDRIPTARNGVALQSFKLTS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcaaaaaccctaaacgaaaaccttcctcaatgtacagcagcaaatcgaagaag
aattatgcaaatcaggattcattgaacaattcgaaaaggcgacgcaaattcgatagcagc
gacgaagaagaagaaaatgggtttgatgcagagatttcgagcgataggtcggatggtggg
gatgactttttcgtggatgaaaatggtagggataagtcagaggatgaattggagaaagaa
actgttgaagagcggcgaaagcgactagcgtgggaccttgttgaaaaagttaggaaaggc
gaggaggaacagaggaaggaggatgaggaagaagatagtgatgatgatgatagagaggag
agagagggtaatagggattctcttgttgttaagattttgcagcaggagcagcttgaagag
agtgggcgaactcgtagattaattgcttcccagttacagaagctaggagataaggaagaa
gcagagtttttgttaaagcatcggcagtctgtaacagctgtggctctatctgatgacgac
agaagagggttttcagcttcaaaggatggttgtatttcccagtgggatgttgaaattaga
aaagcagaaaaatacctttggcccactgaggaagtcttgaagtcccatggtgttagagat
ccacagggtaaatcaaataaaaagggtaaagtaattaagcacagtaagcataccctagca
ttggctgttagttctgatggccgttatctagctacaagtggtttggatcgtcatgttcat
ttatgggatactcggacacgggaacacattcaggcttttacaggacatagagggcctgtg
tcatgtttgacatttaggcaagggacttcagaattattttctggttcatttgatcgaact
gttaggatttggaatgctgaagatagggcgtatataaatactttatttggtcatcagagt
gaggtgttaaccattgattgcatgagaaaggaacgggtattgactgttggacgtgatcga
accatgcagctgtacaaggttccggaggagtcacgtctcgtctatcgttcttctacttcc
gctcttgagtgctgctgtttagctggtaatgatgaattcctatctggatctgatgacgga
agcattgagctgtggagcgtattgcggaaaaagccagtttcaatcgttaaaaatgctcat
actctatctgcattgaagaagcaagtagatctaaattacaacgggacaatgtcgaatggt
catattgaaagtagcgaaatcaaagcaaataatccaagctccagtgcacaatcctgggtc
ggctctgttactgtatgcaggaatagcgaccttgctgcatctggtgctggagatgggtgt
gttcgattatggcaaatcaatagtgagaccaaagccatttcgcccttatttgatgttcct
ttggtggggtatgtgaattctttggctatcgctaaatctggcaggtttctggttgctgga
gttgggcaggaaccacgtcttggaaggtgggatcgtatacctacagctagaaatggggtt
gctttgcaatcgttcaagcttacatcgtag
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