Spinacia oleracea (spinach): 110788474
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Entry
110788474 CDS
T05137
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110788474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110788474
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110788474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_2
AAA_14
AAA_16
TIP49
AAA_22
RNA_helicase
AAA_28
AAA_33
NPHP3_N
AAA_17
Rad17
nSTAND3
AAA_18
ATPase_2
Bac_DnaA
Mg_chelatase
IstB_IS21
Viral_helicase1
Parvo_NS1
TsaE
NB-ARC
AAA_3
ABC_tran
NACHT
Vps4_C
AAA_11
Cytidylate_kin2
Nucleolin_bd
Motif
Other DBs
NCBI-GeneID:
110788474
NCBI-ProteinID:
XP_021848805
UniProt:
A0A9R0JW76
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All DBs
Position
3:complement(107368194..107383420)
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AA seq
821 aa
AA seq
DB search
MGKRGSAGNPQSRRQSTLSPAIIQRRIDSCKINHLSSEDIAEHLYSSYPDYKHYKLIPFR
SKIRQILQQSRRLPISPRNAEDQPENDDNDDDEGDSGSPVIRSPSRKKQRQIIDERERKL
LRTENSHLQLIRRRENSSVSSGSETSVSTSVDAVYGEDVEPEFDLMKSMLRAGYGDTKST
PKSKPKPKAGGDVESNMEVEDVRREKKIAAAASVRGEKSMSEVVEERESKGLCGEVKGKD
GPRFKDFGGIKKVLNELMIEVMVPLYHPQLPQWLGVKPMSGILLHGPPGCGKTQLARAIA
NETGVPFYQISATEVISGVSGASEENIRDLFAKAYRTAPSIVFIDEIDAIASKRENLQRE
MERRIVTQLLTCMDDSHRLVTPSDKHSDSEVDDKTSGYVLVIGATNRPDAVDSALRRPGR
FDREIALGVPDEDARLEILSIFTRNLRLAGDFDLKKIAKATPGFVGADLIALANKAGNLS
MQRIIDQRQLQLSRQEGELIEEWWKEPWSPEEMKKLSITMTDFEEAAKMVQPSSRREGFS
AIPNVKWEDVGGLTLLRKEFELYIVNRIKYPTQYEESGVDLESGFLLYGPPGCGKTLIAK
AVANEAGANFIHIKGPELLNKYVGESELHVRTLFNRARTCAPCIIFFDEVDALTTERGKE
GGWVVERLLNQLLIELNGGDHRRGVFVIGATNRPEVIDSALLRPGRFGKLLYVPLPDLDE
RGLILKALGRSKPLDSTVDLLELGKKEACENLSGADLSALMNEAAMAALEEKLRYPPSSL
DAPRFTIKSKHFEQAMKKVTPSVSEKQKQYYEKLSRTFRAV
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagaggaagcgccggaaatcctcaatcaaggcgtcaatcgacgctatccccc
gccattatacagcggcgcatcgactcctgcaaaatcaaccacctctcctccgaagacatc
gccgagcacctctattcttcttaccccgactataaacactacaaactcatcccttttcgc
tctaaaatccgtcaaatcctccaacagtctcgccgccttccgatttctccccgaaacgcc
gaagaccaacccgaaaacgacgataatgatgatgacgagggggatagtgggtccccggtg
atccggagtccttcaaggaagaagcaaaggcaaattattgacgagagagaaaggaagttg
ctaagaacagagaatagtcaccttcaattgattaggaggagggagaattcgtcggtttct
tcgggttcagagacatcagtttcgacttcggtggatgcggtttacggggaggatgtggag
ccggagtttgatttaatgaaatcgatgcttagggcaggatatggtgatacgaaatcgaca
ccgaagtcgaaacctaaacctaaggcaggtggtgatgtggaaagtaatatggaggtggag
gatgtaaggagagagaagaagatagctgccgctgcatcggtgagaggggagaaaagcatg
agcgaggtggtggaggaaagagaatccaagggtttgtgtggcgaggtgaagggtaaagat
ggtcctaggtttaaggattttggggggattaagaaagtgttgaatgaattgatgattgaa
gttatggtgcctctttatcacccacaattgccccaatggctaggggttaaaccaatgtct
gggattttgcttcatggtcctcctggttgtgggaagactcagttggctcgcgccattgcg
aatgagaccggtgttcctttctatcagatttctgctaccgaagtcatctctggtgtttct
ggtgcatccgaggaaaatatccgtgatctttttgcgaaagcgtacagaactgctccatct
attgtatttattgatgaaattgatgcaatcgcttccaaaagagaaaatctacagagagag
atggagaggcgaatagttacgcaattgttgacctgcatggatgattcccataggcttgtg
acgccaagcgataagcattcagattctgaagttgatgataagacatcggggtatgttctt
gttattggagctactaataggccggatgctgttgattctgcgttgagaaggccaggacga
tttgacagagagattgcattgggagttcctgatgaagatgcaaggcttgagatactttca
atatttacacgaaatttaaggcttgctggtgattttgatttaaaaaaaatagccaaggcc
actccagggtttgttggtgctgacttgattgccttggctaataaggctggtaacctttct
atgcagaggatcattgatcaaaggcaattgcagctgtctaggcaagagggggaacttatt
gaggagtggtggaaggaaccttggtcacctgaagagatgaagaaactaagcattactatg
acggactttgaggaggcagctaaaatggtgcaaccatcttcaagaagagaagggttctct
gccattcctaatgtgaagtgggaggatgttggagggctcaccttattgagaaaggagttt
gaactttatattgttaatcgtattaaatatcctacacaatatgaggaatctggagtggac
ttggagtccggatttttgctttatggcccccctggttgtggcaagactctgattgccaag
gcagtagctaatgaggctggagccaattttatacacataaagggccctgaacttctaaac
aaatatgtcggtgaaagtgaattgcacgtacggacactcttcaatcgtgcgagaacatgt
gctccatgcataattttctttgacgaggtggatgctcttacaacggagcgtggaaaagaa
gggggttgggttgttgaacggcttttaaatcagcttttgattgagctaaatggcggggac
cacaggcgtggtgtttttgttattggtgctacaaatcggcccgaggtgatcgacagtgca
ttgttaaggcctggaagatttggaaaattattatatgtccctctaccagatcttgatgag
cgtggcctgattttgaaagctttgggtaggagcaaaccgctagatagcactgtggatttg
cttgagcttgggaagaaagaagcttgtgaaaatctgagtggagccgatcttagtgcactg
atgaacgaagctgcaatggctgcgcttgaagagaagctgagatatcccccaagctcccta
gacgcccctcgatttactatcaagtcgaaacattttgagcaagccatgaagaaagttact
ccgtccgtttccgaaaagcaaaagcaatattacgagaaattgtcacggacctttcgagcg
gtctga
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