Spinacia oleracea (spinach): 110788652
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Entry
110788652 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110788652 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110788652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110788652
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110788652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
110788652
NCBI-ProteinID:
XP_021848982
UniProt:
A0A9R0IGN1
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Position
3:complement(153416109..153431703)
Genome browser
AA seq
1048 aa
AA seq
DB search
MAIEPLGHRVSDLIKEVNLELSPSLTKLVDKTISSIKNVIANIPEDFQVTADEAPGFVRD
VGADKVDFKFKKPQFVEIGGSYSIGCIVKPDVNIDLLMRLPKDCFHEKDYLNHRYHAKRF
LYLSVIKRYLESSEIVCKIEWSCLQNEACKPIMIIYPEGANLPGFSVRIIPTASSLFNIT
KLNATRNNVRALNQDGVSLPTPKYNSSILEDMFIEEFAELIKEKFHDWEELRKALVLMKV
WARQRSSIYSYDCLNGFLMAAIMSYLAANRVGGFFNKSMNAMQIFRVTLGFIASSKSWEK
GLVMHHKENCNISREELKEKKQCLKSFPVVICDSSANFNLAFRISKSGFLELQAEAALTL
ECIQKCHDNGFEEVFLTKSDFAAKYDYCVRLNLKGNSGVHASGYCVDDECWRLYEEKVHS
LLCQGLNDRAKFIRVIWRNWSSNCRIQDGFSSLDKEPLLIGVAISDLEKALRLVDKGPNP
EHKQEVAKFRKFWGEKSEFRRFSDGTIGECVVWKYKQWEKHQIVKKIVEHVLSRHLSLSI
ENVVVSADQLDFSLCHGGADPISYTGGLLEAYEALAKHLRLLDDIPLKISSVQPLDSAFR
CTAVFPPEPHPLAGDKTFISRSVKVAATCVQPMEVLIQLEGSGNWPMDELATEKTKSAFL
LKIGESLQKKWDVSCIATEDDVDVLLSGYAFRLKILHERGLSLVKGEGNQVKRVSSIDKK
LFIRSQHSSMINGLQGRCPVYGPVVRLAKRWAASHLFSACLESEAIELLVAHLFLNFKPF
CAPNSRITGFLRFLRLLSEYDWKFSPLIVDINGDMTADNVTEINKNFMSSRKAHEGSVSE
AIPAIFLGTTYDKCSEAWTSSSPNPLGLKRLVAYARSSANLLTKLVEQDHYDSHGWECLF
RTPLNNYDAVVLLHRDKLAYPQRLLFPSEVKEGKYVARGNPSNYFSPIFRPKDVKGGLDV
IKTKIMVDFDPLQCYLMDIQGGFPNSFNLWYDSLGGDAIGITWNKSASKKRDRDEDSKDA
TDILKAVGEAGNGFVRSVHLLKAPRLCN
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcgatagagccactaggacacagagtaagcgacctcataaaggaagtaaacttggag
ctctcaccttcacttactaagctcgttgataaaactatttcttccattaagaatgtcatc
gccaatattcctgaagatttccaggttactgcggacgaggctccagggttcgtgagagac
gttggtgctgataaagttgattttaaattcaagaagccccaattcgttgaaattggggga
agttattcaattggctgcattgtgaagccagatgttaatattgatcttctaatgcgtttg
cctaaggattgttttcatgagaaagattacttaaatcacaggtatcatgccaaaaggttc
ctttacctttctgttatcaagaggtacctggagtcttctgaaatagtatgcaagattgaa
tggtcctgtctccaaaatgaggcgtgcaaacctataatgatcatatatccagaaggtgcc
aaccttcccgggttttctgttagaataatacctaccgcctcatccttattcaacatcacc
aagctgaatgcaacccgaaataatgtgcgggcactgaaccaagatggagtttcgttacct
acaccgaagtataacagcagcattttggaagatatgttcattgaagagtttgcagaatta
attaaagagaagtttcatgactgggaggaacttcgtaaagctttggttttaatgaaggtc
tgggcacgccaaagaagttcaatatatagttatgattgcttgaatggtttcttaatggct
gccataatgtcctatcttgctgcaaatagagttggtggattttttaacaagtcgatgaat
gccatgcaaatttttcgtgtcactctgggcttcattgccagttcaaaatcatgggagaaa
ggcttagttatgcatcacaaagagaactgcaacatttcaagagaggagttgaaggaaaaa
aagcaatgtttgaagtcatttccagtagtcatatgtgatagttctgcaaacttcaatttg
gcattccgtatatcaaagagcggctttcttgagcttcaagcggaggctgctttgacactt
gagtgtattcagaaatgtcatgacaatggatttgaagaagtttttttgactaaatctgac
tttgctgccaaatatgactattgtgtgaggttgaacttgaagggaaacagtggcgtgcat
gcatcaggttattgtgtcgatgatgaatgttggagattgtatgaggagaaggtgcattca
cttttatgccagggtttgaatgacagagcaaagttcattcgtgtcatctggagaaactgg
tccagcaattgtcgtattcaagatgggttctcatccctagataaagaaccattgcttatt
ggtgttgctatcagtgacctggaaaaagctcttagattagttgataaaggccctaacccc
gagcataaacaggaggttgccaaatttcggaagttttggggagaaaagtccgagtttcgg
agatttagtgatggtaccattggagaatgtgttgtgtggaaatacaagcagtgggagaag
catcaaattgtaaagaaaattgttgagcatgtattatcacgtcatctttctctgtcgata
gaaaatgtagttgttagtgcagatcagcttgatttttctctgtgtcatggtggtgcagat
cctatatcatataccggaggcttacttgaagcctatgaagctttagccaagcacttgcgc
cttttggatgatattcccttgaagatatctagcgttcaacccttagattcagctttcagg
tgcactgctgttttccctcccgagcctcatcctctggctggagataaaaccttcatatca
agatcggtaaaggttgctgcaacctgtgtacaaccaatggaagttttgattcagttggag
gggtcaggaaattggccaatggatgaattggccactgaaaagactaaatctgctttcctt
ctaaagattggagaaagtcttcaaaaaaagtgggatgtcagctgcattgccactgaagat
gatgtggatgtgttgctttctggatatgctttccggctaaagattttacacgagaggggc
ctgagtttggtgaaaggagagggaaatcaagtcaagcgcgtgtcttccatagacaagaaa
cttttcattcgtagtcagcattctagcatgatcaatggtttgcaggggcggtgtcccgtt
tatggtccagtagtcaggcttgcaaaacgatgggcagcttcacacctcttttctgcttgc
ttggaaagtgaggctattgagctcttagtagctcatttatttctgaatttcaaaccattc
tgtgctcctaactcgaggattacaggttttttgaggttcttgagattgttgtccgagtat
gattggaaattctctcctttgatcgttgatataaatggtgacatgactgctgataatgtg
acagagatcaataagaactttatgtcaagtagaaaagctcatgaaggcagtgttagtgaa
gcaatccctgcaatatttttaggtacgacctatgataagtgttctgaagcttggacatct
tcgtcaccaaatcccttggggcttaaaaggttggttgcttatgctcggagcagtgctaat
ctgttgacaaaactcgtagagcaagatcattatgattcacatggatgggagtgtcttttc
cggactcctttaaacaactatgatgctgtagttcttctacacagagacaaattagcatat
ccacaacgtctcctctttccgtctgaggttaaagaaggcaaatatgtggcccgtggaaat
cctagcaattacttctcacccatttttaggcccaaggatgtgaaaggaggcttggatgtt
ataaaaacaaagataatggtggattttgaccctctacaatgctatcttatggatatacag
ggagggttcccgaattcgttcaatctgtggtacgattctttgggtggtgatgctattggt
ataacatggaacaaatctgcatcaaagaaacgagatcgagatgaagatagtaaagatgct
acagacatcttgaaagccgttggtgaagctggtaacggttttgtgaggagtgtccatctt
ctcaaggctcctaggctttgtaactag
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