Spinacia oleracea (spinach): 110788774
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Entry
110788774 CDS
T05137
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110788774
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110788774
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110788774
NCBI-ProteinID:
XP_021849105
UniProt:
A0A9R0JWH3
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Position
6:130786392..130792004
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AA seq
446 aa
AA seq
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MAEISLRNFALFTFLISACFLCVVVNGRLSEDEVTLRVEEQLKSLMNSSMADRIKEAEKR
NEQAAVEQPEEIMSMVQRSISNSTARRNLGYFSCGTGNPIDDCWRCDRNWHNNRKRLADC
AIGFGRNAVGGRDGRFYVVTDPTDHDAVNPKPGTLRHAVIQEEPLWIVFQRDMVITLKEE
LIMNSFKTIDGRGANVHIANGACITIQFITNIIIHGIHIHDCKPTGNAMVRNSPSHYGFR
GMADGDGISIFGASHIWIDHNSLANCADGLIDAVIASTAITVSNNYFTHHNEVMLLGHSD
SYTKDKIMQVTIAYNHFGEGLMQRMPRCRHGHFHVVNNDYTHWEMYAIGGSADPTINSQG
NRYLAPSNPFAKEVTKRVETNQGNWKHWNWRSEGDLLLNGAFFTPSGSGAGASYARASSL
AAKPSSLVSTLTSGAGVLTCRRGRSC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatttctctgagaaactttgctctgttcacattcttgatttcggcgtgcttc
ttatgcgttgtcgtcaatggccgattgtccgaagacgaagtaactttgagggttgaagaa
cagctgaaaagcttgatgaattcatcaatggcggataggatcaaagaagctgaaaagaga
aatgagcaagctgcagttgaacaacctgaagagattatgtctatggtccaaaggagcatt
agcaacagcacagctaggagaaacctgggatacttctcatgtggaacagggaacccaatt
gatgactgttggaggtgtgatcgtaactggcacaataaccgaaagaggcttgctgattgt
gctattgggtttggccgcaatgctgttggtggccgtgatgggaggttttacgtggttact
gatcctactgaccatgacgctgtgaacccaaagcctgggactctccgtcatgctgtcatc
caagaggagccactttggattgtttttcagagggatatggtgatcactttgaaggaggag
ctcattatgaacagttttaagaccattgatggaagaggtgcgaatgtccatattgctaat
ggagcttgtattaccattcagttcatcaccaatattattatccatggtattcatatccat
gactgcaagccaactgggaatgcaatggtgagaaattccccttctcattatgggtttaga
ggcatggctgacggtgatgggatttccatctttggagcaagtcatatatggattgatcac
aactcccttgctaattgcgcggatgggctcattgatgcagtcattgcatccactgccatt
accgtttctaacaattatttcactcaccacaatgaggtgatgttgctgggtcacagtgac
tcgtacacaaaggataagataatgcaggtcaccattgcctacaaccactttggagaaggt
cttatgcagaggatgccgaggtgtagacatgggcatttccatgttgtgaataatgactac
acccactgggaaatgtatgccattggaggaagtgcagatcctaccattaacagtcaaggg
aatagataccttgccccatccaacccttttgccaaagaggtgacgaagagggtggaaaca
aatcaaggaaattggaagcactggaattggagatcagaaggagatctacttctaaatggt
gcctttttcacaccatcaggatcaggagctggtgctagctatgcaagagcctccagcttg
gcagccaagccttcgagccttgtatcaactctgacttcaggtgccggtgttctcacttgt
cgtcgtggtagatcttgctag
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