Spinacia oleracea (spinach): 110788859
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Entry
110788859 CDS
T05137
Name
(RefSeq) nuclear pore complex protein NUP98B-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110788859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110788859
03036 Chromosome and associated proteins [BR:
soe03036
]
110788859
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110788859
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110788859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
110788859
NCBI-ProteinID:
XP_056687674
LinkDB
All DBs
Position
6:complement(122486954..122500835)
Genome browser
AA seq
987 aa
AA seq
DB search
MAGVFGQVSGSFGASSEFGNAAGNSSNPFAINTTGTTNFPSFSTQGSGFGGCTTNAFGAT
SCLFGNASNLSNSFSPNSSGTTNFPSFSTQGSGFGGGTADVFGATSSSFVNSSNPTNLFT
PNTTVTTSFSTQGPVFGGSTTNVFGATSSSFNASNLSNHFSPNTTRTTNFPSSSTQGSGF
GSGTTSVFGATSSSFGNASNLLAPNTAGTTNFTSLPTQRSVFGGSTVSVFGVSSSSLGTS
REGNASSSSNPFSLQNQGSFWSGAANVFGAPSSSSNFSFGQTSGSTNSNHNASLNAFGAA
SSPSSNPFAPSTFGTTTSPSFTSNGSFFGGNSTGEFGVRSASSPSFTFGKPAAIFKSSTV
ATTSIGSHGPNGSTSGGAFRGPSSSLFGQGSGSSASSTSFLTSPAPFWFGNKAGTSGPSA
EVGFTSNKSNNVAVMPLTSNFPGTTHANLFSTSSSAASSSLPAGDGYRNKQYKHTIIKED
SKSYKLMSVSGMPFYESKSHEELRWEDYELKYGSQWNSVGNQAQEINNQKLDFCLPSATS
SLDILSPSPTNMSTSTFSFPCLPSPDPSPNLSAFHGCHQITASVLNKQPLQNPQLPTQDV
GLQPNHLLESVLKTHSPYNGNSASHTIQAPSLWTVPPVSPASTGNNGGASLDAGLPRIGL
QQQLTAPGKVMDSIIAVKDPFGSEPARSWPFFGHSACLPFAHPGISSMPVSNKPAKTRGS
SYFTSRHHSLKPLALHVRKYHPSTDGPKVPFFDPADDIQYTSKAYSYIVPRENPRSVIAA
STGPTHVSAPENEASPLNHSSAVDYEECRDNAKKAQISSSALNSHKDDFSDNAKEMNELL
IPKLQRADYYTEPKIEMLASIEISNPGFCCRVKDFVVGRNDYGWVKFHGETNVVRLNLDS
LVEFNYREVIVYADEDEKPPVGQGLNKSAEVTLLNVKCVDKTGKEYTSGKMVEKYIEKLK
QVAQKQGAEFVSYDPVKGEWKFCVQHF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtgttcgggcaagtttctggttcctttggggcgtcaagtgagtttggaaat
gctgctggtaattcgagcaatccgtttgctattaatacaacagggactacaaatttccca
agtttttcgacccaagggtcaggctttgggggttgtacaaccaatgcatttggtgcaaca
tcttgtttgttcgggaatgctagcaatttgagtaactcgttttcccctaattcatcaggg
actacaaatttcccaagtttttcgacccaagggtcaggctttgggggtggtacagccgat
gtatttggagcaacatctagttcctttgtgaattcaagcaatccgactaacttgtttacc
cctaatacaactgtgactacaagtttttcaacccaagggccagtttttgggggcagtaca
accaatgtatttggagcaacatctagttcattcaatgctagcaatttgagcaatcatttt
tcccctaatacaacgaggactacaaatttcccaagttcttcaacccaagggtcgggcttt
gggagtggtacaaccagtgtatttggagcaacatctagttcgtttggcaatgctagtaat
ttgttagcccctaatacagcagggactacaaatttcacaagtttaccgacccagagatca
gtttttgggggtagcacagtcagtgtgtttggagtgtcatcgtcttcattgggaacatca
cgtgagggaaatgctagcagttcgagtaatccgttttctcttcaaaatcaggggtcattt
tggagtggtgcggccaatgtatttggagcaccatcgtcttcctcaaacttctcgtttgga
caaacatctggttctaccaattcaaatcataatgcttctctcaatgcatttggggctgct
agcagtccgagttccaatccatttgctcctagtacattcgggactactacttccccaagt
ttcacaagcaacggatcattttttggtgggaattcaacaggtgaatttggtgtgcggtcg
gcttcttccccatccttcacgtttgggaaaccagctgctatctttaaatcatcaacagtt
gcaaccacaagcattggaagtcatggtccaaacggctctacatcagggggagcatttaga
gggccatcttcttcattgtttggacaaggttctggttcctctgcatcatcaacttcattt
ctgacttctcctgcccccttctggtttgggaataaagcaggtacttccggaccatctgca
gaggttgggtttaccagtaataagagtaacaatgttgcggttatgccgttaacttcaaat
ttccctggaacaacgcatgccaatctattttcaacttccagttctgcagcttcctcatca
ttaccagcaggagacggatacagaaataaacagtataagcatactattataaaggaagat
tccaaaagttacaaactaatgtcagtatcaggcatgcctttttatgaaagtaaaagccat
gaagaattgagatgggaggactatgagctgaaatatggaagccagtggaattcagttggt
aaccaggcacaagagattaacaaccagaaattagacttctgtcttccttcagctactagc
tccttggatatccttagtccatcccccacaaatatgagtacttctactttctcattccct
tgtctacctagtccagacccatcaccaaatctatctgcatttcatggatgtcaccaaatc
actgcaagtgttttaaataaacagccgctacagaatcctcagttaccaactcaagatgta
ggactgcagcctaatcacttattagaatcggtactaaaaacccactcaccgtacaatgga
aattcagcgagccatacgattcaagcaccatctctctggacagtacctcctgtgagtcct
gcctcaacagggaataatgggggcgcttcacttgatgctggtttaccccggatcggtctt
caacaacagttgactgcgccaggcaaggtcatggacagcattatagcggtgaaagatcct
ttcggatctgaacctgcaagatcctggccattttttggacactctgcctgtttgccattc
gctcatcctggaatctcgagcatgcctgtgtctaataaacctgcaaaaactagaggctca
tcttattttacatcaaggcaccattcactcaagccgttggcattgcatgtcaggaaatat
catcctagcactgatggtccaaaggtgccattctttgatccggctgatgatattcaatat
acaagcaaggcatatagttatatagttccgagggagaatcccaggtcagtaattgctgct
tccactggcccgacccatgtcagtgctcccgaaaacgaggcatctccgctgaatcattca
tctgctgtggattatgaggagtgtagagacaatgctaagaaagcacaaatcagcagttcc
gcactcaactctcacaaagatgatttttctgacaatgcaaaagagatgaacgagttgttg
attccaaagcttcaacgcgctgattattacacagagcccaaaattgagatgttagcatca
attgaaatatctaatccaggattttgctgccgtgtaaaggacttcgtagtgggacgaaat
gactatggttgggtgaagtttcatggggagacaaatgtagttagactaaaccttgactca
ctcgttgagttcaattatagagaggtgatagtgtatgctgatgaagatgagaagcctcca
gttggacaaggccttaacaagtcagctgaagttactctcctaaacgttaaatgcgttgac
aagactggaaaagagtataccagtgggaaaatggttgaaaaatacattgagaagctgaag
caggtggctcagaagcaaggtgctgagtttgtctcctacgatcctgttaaaggagagtgg
aagttttgcgtacagcatttttag
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