Spinacia oleracea (spinach): 110789245
Help
Entry
110789245 CDS
T05137
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110789245
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
soe01009
]
110789245
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110789245
03036 Chromosome and associated proteins [BR:
soe03036
]
110789245
Protein phosphatases and associated proteins [BR:
soe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110789245
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110789245
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110789245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
ComGF
Motif
Other DBs
NCBI-GeneID:
110789245
NCBI-ProteinID:
XP_021849584
UniProt:
A0A9R0IHT2
LinkDB
All DBs
Position
1:121280724..121292916
Genome browser
AA seq
516 aa
AA seq
DB search
MNGGGGSGGGGDGGMTPPSPPLDWKFSQVFGERTAGEEIQEVDIISAIEFDKTGDHLATG
DRGGRVVLFERTDKKGHDGPRRDLEKMDCSTSRHPEFRYQTEFQSHEPEFDYLKSLEIEE
KINKIRWCQMANGALFLLSTNDKTIKFWKVQDKKIKKVCNVNLDPSKISGSPTDAGMLAS
PKGISNGGSNIKPVNCLSTDFSFPPGGIASLRLPTVTSQETSLMASCRRVYGHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPSNMEDLTEVITSAEFHPTHCNT
LAYSSSKGSIRLIDLRQSALCDSHSKLFEVQEAPGSRSFFTEIIASISDIKFAKDGRYML
SRDYMTLKLWDIHMDSGPVSTFQVHEHLRPRLCDLYENDSIFDKFECCLSGDGQRAATGS
YSNLFRVFGCSSSSAEATTLEASKNPMRKQLPTTTNHRPSRTGTFTRGARQGSESPGSDA
NGNAFDFNMKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggcggtggtagtggaggtggtggtgatggaggtatgactccgccgtcgccg
ccgctggattggaagttctctcaagtgtttggggagagaactgctggtgaagagattcaa
gaagttgatataatatcagctattgaatttgataagactggggaccaccttgctactggt
gatcgtgggggtcgggttgttttgtttgagaggaccgacaaaaagggtcatgatggacct
agaagagatcttgaaaagatggattgttcaactagtaggcatcccgagttccgctatcag
accgagtttcagagccatgaaccagagtttgactacctaaagagcttagagatcgaggag
aaaattaataaaatcagatggtgtcagatggctaatggtgctctgtttcttctttctact
aatgacaaaaccatcaaattctggaaggtccaagacaagaaaatcaagaaagtgtgcaat
gtgaatttggatccatccaagataagtggctctcccactgatgctggtatgttggcaagt
cctaaaggcatttcaaatggaggatctaatatcaaacctgtcaattgtttgagcactgac
ttttcattcccgcctgggggcattgcatcactacgcttacctacggtaactagtcaagaa
acaagtcttatggcaagttgtagaagagtatatggtcatgcgcatgactatcatatcaat
tctatttcaaataacagtgatggcgagacctttatttcggctgacgatctccgcatcaat
ctttggaacttggaaattagcagtcaaagcttcaatatcgttgatgttaagccgtcaaac
atggaggatctgactgaggtgataacgtcagcagaatttcaccctacccactgcaacacg
ttagcatacagtagttcaaagggttctatccgactaattgacctacggcagtctgcttta
tgcgatagtcatagcaaactgtttgaggtgcaggaggctcctggttcaagatcttttttc
actgagataattgcttcaatttcagatatcaagtttgcaaaagatggtagatatatgctc
agtcgtgactatatgactcttaagctgtgggatatacatatggattctgggcctgtttca
actttccaggtccatgaacatctcagaccaaggctctgtgatttgtatgaaaatgattcc
atttttgacaaatttgaatgctgtctgagtggagatgggcagcgagcagcaactggctct
tacagcaacttgtttcgtgtttttggctgctcttcgagtagcgcagaagccacgacctta
gaagccagcaaaaaccccatgaggaagcaacttccaaccacaacaaaccatagaccttca
agaacaggcacctttacacgtggtgcaaggcaaggatcggagagccctggaagcgatgca
aatggaaatgcatttgatttcaatatgaagttgcttcatttggcatggcaccccaccgaa
aactcaattgcatgtgctgctgcaaacagcctgtatatgtattatgcctag
DBGET
integrated database retrieval system
