Spinacia oleracea (spinach): 110789315
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Entry
110789315 CDS
T05137
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00900
Terpenoid backbone biosynthesis
soe01100
Metabolic pathways
soe01110
Biosynthesis of secondary metabolites
Module
soe_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
110789315
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
soe01006
]
110789315
Enzymes [BR:
soe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
110789315
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
110789315
2.5.1.29 geranylgeranyl diphosphate synthase
110789315
Prenyltransferases [BR:
soe01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
110789315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
110789315
NCBI-ProteinID:
XP_021849660
UniProt:
A0A9R0JX18
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All DBs
Position
4:complement(176692517..176697438)
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AA seq
341 aa
AA seq
DB search
MALFSLTSSFRTLNLPNLRHSPPPHRLLSVQIKCSVPSSPAMPTISSSTSQFDLRTYWTT
LIEEINQKLDESIPISYPEKIYEAMRYTALDKAAKRAPPVMCITACELFGGHRTAAFPTA
CALEMVHAASLIHDDLPCMDNDQVRRGHAANHVVYGEDMAILAGDALFPLGFSHIVSHTP
REIVPETRVLKVIAEIARTVGSTGMVAGEFLDLEGGQNAVDFIQEKKFGELAECSAVCGG
ILAGANEEEIQRLRRYGKAVGILYQVVDDILKEKAKSDGEIKRRGKSYVSVYGLDKAKEV
AEDLRAQARKELDTFESYGEKVIPLYSFVDYAADRGFSVGG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggccttgttttccttaacgtcgtcgttccgcaccctcaacctccctaacctccgccac
tcacctccaccccaccgcctccttagtgtacaaatcaagtgctccgtgccatcatcaccc
gccatgccaaccatctcatcatccacctctcaattcgacctccgcacttactggacgacc
ctgattgaagagatcaatcagaagcttgatgaatctatcccgatttcttaccctgaaaaa
atctacgaggctatgcgatacaccgcccttgataaagccgctaaacgggccccacccgtc
atgtgcatcaccgcttgtgagcttttcggcggtcaccgcactgccgccttccctactgcc
tgtgccctggaaatggttcatgctgcttctctaatccatgatgaccttccatgcatggac
aatgaccaagtaagacgaggccatgcagctaaccacgttgtctatggggaagacatggcc
attcttgcaggagatgcacttttccctcttgggttcagccacattgtttcacatacccca
cgtgaaatagtccccgagacacgagttctgaaggtcattgccgagatagcccggactgtg
ggatcaacaggtatggttgcaggcgaatttttggatcttgaaggtgggcaaaatgctgtg
gacttcatccaagaaaaaaagttcggggagctagcagagtgctcagctgtgtgtggagga
atcttggccggtgccaatgaagaagaaatacaacggctcagaagatacggtaaagcagtg
ggtattctgtatcaagtggtggatgatattttaaaagagaaagcaaagagtgacggagag
ataaaaagaagagggaaaagctatgtgagcgtttatggattggacaaggctaaagaagta
gctgaggatttgcgagctcaagcgaggaaagagctggacacttttgaaagttatggcgaa
aaggttatcccactttacagctttgttgattatgctgcggacagaggatttagtgttggc
gggtga
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