Spinacia oleracea (spinach): 110789372
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Entry
110789372 CDS
T05137
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110789372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soe03009
]
110789372
Ribosome biogenesis [BR:
soe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110789372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
RuvB_N
AAA_lid_3
AAA_16
AAA_5
AAA_14
AAA_22
AAA_2
NPHP3_N
AAA_28
RNA_helicase
TIP49
Mg_chelatase
AAA_33
nSTAND3
NB-ARC
AAA_17
NACHT
AAA_18
Rad17
IstB_IS21
Viral_helicase1
Parvo_NS1
ATPase_2
TsaE
Sigma54_activ_2
ABC_tran
nSTAND_NTPase5
AAA_7
AAA_3
Sigma54_activat
AAA_19
AAA_lid_PRS2_C
DUF815
Nucleolin_bd
SR-25
Motif
Other DBs
NCBI-GeneID:
110789372
NCBI-ProteinID:
XP_021849724
UniProt:
A0A9R0IKB6
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All DBs
Position
4:complement(39796082..39802896)
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AA seq
788 aa
AA seq
DB search
MRKRRSSHVARSSYWNHSMLLRRLGSCNRYESVEDVVKDLCSRYSEYKRLSAAILTKNVQ
EALSELNWKQNKDSGRRDVNVRQSTSTSSSSSSSFESNSMSAPTDGQVSNPKFDFMKSTL
RETYCHGGFESDKTEESMKKKKEITNVELLEKEEENDAMEDIVMHERIDGGTGRKDLDLE
HGRDKVQGQPMFKDFGGMHDVLEELKYNVLIPLRYPELLNRLSQLHAGPPTGILLHGPPG
CGKTMLAQAIANEANVPLYQIAAPEIVSGVSGQSEENIRDLFLKARRTSPSIIFIDEIDA
IAEKRENLQKGMEGRIVTQLLKCMDNIYGLALVADPKSSNCESRPSLSPAVPEISVPERR
QSHVLVIGATNRPNSLDPALRRPGRFSWEIELGVPDENARFEILSVLTHDLGVQEGLDLK
KMARDTQGFVGADLEEYVRKASLHAMQTMINLKKAGDNKERALEHHDDNWWKNLHFMHGE
VETLYPTMADFEVAVKRVQPSLKREGFSTVPNVKWEDVGGLGTLREEFQSCIINPIKYPE
EYGAFREDLPAGFLLYGPPGCGKTLIAKAVANEAGASFIYIKGPELMDKYVGESELAVRK
IFSRARTCSPCILFFDEVDALTANRGESSGVTDRVLKQLLIELDGAEERRGVYIIGATNR
PELIDRALLRPGRFEELLYIPLPSPQERGLILRALARKRPIDTNVDLIEIAERTACDNFS
GADVACLMRRASRVSHQEMQLSKQKGSGAILWIINTSHFEKALVGMSPSVNKKQREFYDS
LSRSFKPT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagagacggagttcccacgttgctcgtagtagttattggaatcattctatgctt
ttacgtcgtttagggagttgtaaccgttatgagagtgtggaggatgttgtgaaagatttg
tgttcgaggtattcggagtacaaaagattgagtgctgcaattctcactaaaaatgttcaa
gaggctctttctgaattaaactggaagcaaaataaagatagtgggcgcagagatgttaat
gttcgacaatcaacgtcaacttcatcgtcatcatcttcatctttcgagtcaaattcaatg
tcggcaccaacagacgggcaagtttcaaatccaaagtttgactttatgaaatcgacgctg
agggaaacctattgccatggtggatttgaatctgataagacagaagagagtatgaaaaag
aaaaaagagataacaaatgtggaattattagaaaaggaagaagaaaatgatgcaatggag
gatattgtaatgcatgagagaatagatggaggaacaggaagaaaggatttggatttagag
catggaagagataaggtgcaagggcagcctatgtttaaggattttggtggtatgcatgat
gtattggaggaattgaaatacaatgtgcttatcccacttcgttatcctgaactcctcaac
cgactaagtcagttacatgcagggccaccaacaggaatattactgcatggacctcctggg
tgtggaaagaccatgttggctcaagctatagctaatgaggccaatgttcctttatatcag
attgcagcgcctgagatagtatctggtgtttcgggtcaatcagaagaaaacatccgtgat
ctattcttgaaagctcgcaggacttctccttcaattatattcattgatgagattgatgcc
attgcggaaaaaagagaaaacttgcagaaagggatggaagggagaattgtcactcaacta
ttgaaatgcatggataatatctatgggcttgcacttgtagctgatccaaagagttccaat
tgtgagagtagaccatctttatctccggcagttccggagatttcagttcctgagaggagg
caaagccatgttcttgttattggagcaaccaaccgcccaaactctctcgaccctgcatta
aggcgacctggaagatttagctgggagattgaactaggagttccagatgaaaatgcaagg
tttgagatactttcggtgctgacacatgatcttggtgttcaagagggtttggaccttaaa
aagatggctagggatacacaagggtttgtaggggctgacttggaagaatatgttaggaaa
gcttctttacatgctatgcagacaatgataaacttaaagaaggctggggacaataaggag
cgtgcgcttgagcaccatgatgacaattggtggaagaatttacattttatgcatggagaa
gtggaaacactctaccccacaatggcagattttgaggttgcagttaaacgcgttcaaccg
tctttgaaaagggaaggtttctctacagttcctaatgttaaatgggaagatgttggaggc
cttggtaccttaagggaggagttccagagctgtataattaatcctataaagtatcctgaa
gaatatggggcgtttagagaggatttacctgctggttttttgctttatggcccccctggt
tgtggtaaaacgctgattgccaaggctgttgctaatgaggctggagccagtttcatatat
atcaagggtcctgaacttatggacaaatatgttggtgaaagtgaattggctgttcgcaaa
atctttagccgtgctaggacatgttctccatgtattctcttctttgatgaggtggatgct
ttgactgcaaatcgtggagaatctagtggggttactgatagggttcttaagcagcttctt
attgagctagacggtgcggaggaaagacggggggtgtacatcattggtgctacaaatcga
cctgagttgatagatcgtgctttattgaggcctggaagattcgaggaactattatacatc
cctctgcctagtcctcaggaacgtggcttaatattgagagcccttgctaggaagagacca
atagataccaatgtggatttgatcgagattgcagagaggacggcttgtgataattttagt
ggtgctgatgttgcctgcctgatgcgcagagccagtagggtgtctcatcaggagatgcaa
ttatcgaagcagaagggttcaggtgccattctgtggattattaacacaagtcatttcgaa
aaagcattggtgggaatgtctccttctgttaacaaaaagcaacgagaattctatgatagt
ctgtcgcgcagttttaagccaacctaa
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