Spinacia oleracea (spinach): 110789489
Help
Entry
110789489 CDS
T05137
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110789489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110789489
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110789489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Tht1
Motif
Other DBs
NCBI-GeneID:
110789489
NCBI-ProteinID:
XP_021849857
UniProt:
A0A9R0IIT6
LinkDB
All DBs
Position
5:14541629..14551223
Genome browser
AA seq
944 aa
AA seq
DB search
MDDDLHFLDQNKLPELKLDAKQAQGFLSFFKTLPQDSRAVRFFDRRDYFTAHGENASFVA
KTYYHTTTALRQLGSGSDGLSSVTISKSMFETIARDLLLERTDHTIELYEGSGSNWKLVK
SGSPGNLGIFEDILFANNEMQDSPATVALLPNFRENGCTVGLGYIDLTKRVFGLAEFLDD
SHFTNVESTLIGLGCRECLLPVDVVRSTEGKGLVDALSRCGVMVTERKKSDFKARDLVPD
LGRLVKGSIEPVRDLVLGLEIAPAALGALLSYAELLSDESNYGNFAIKPYNLDSCMRLDS
AAMRALNVMESRNDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDLVQ
AFVEDIELRQDLRQHLKRISDIERLTRNLQKKRAGLQNVVKLYQSSIRLPYILSALGRYE
GQFSALMKERFSDPLGICSDDDHLNKFVALVETSVDLDQLENGEYMISSGYDSRLLELKE
EQESLDSQIDSLHIKTANDLDLSADKVLKLEKGTQFGHVFRITKKEEPKIRKKLTTQFVV
LETRKDGVKFTNSKLKNLGDQYQRVLEEYKNCQKELVQRVVQTAATFSEVFESLASLLAE
LDVLLGFADLAASCPTPYTRPDITPSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGQ
SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSYVPCDNAIISVRDCIFARVGAGDCQLRG
VSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVDVIKAPTLFA
THFHELTTLAHDNRGAGPSNKKSAGIANYHVSAHIDSSSRKLTMLYKVEEGACDQSFGIH
VAEFANFPETVVSLAREKAAELEDFSPATKNADDLSKEVGQKRKREFDPDAVSEGAARAH
QFLKEFAEIPLETMDLEKALEHVNKMKSDLEKDSENCQWLKQFL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatttgcatttcctcgatcagaataaactcccagaactcaagctcgatgca
aagcaggctcaagggtttctttcattcttcaaaaccctgcctcaggattctcgggccgtg
cggtttttcgatcgtcgggattattttactgcccatggagaaaatgcatcttttgtcgca
aaaacttattaccacactaccacagccctaagacaattagggagtggttctgatggccta
tccagtgtaactataagtaaaagcatgttcgaaacaattgctcgtgatttacttttagaa
aggacagaccacacaattgagctatacgagggtagtggttctaattggaaacttgtgaag
agcggaagtcctggaaacttaggaatttttgaagatattttatttgcaaataatgaaatg
caagattctcctgcaacggttgcattgttaccaaacttcagggaaaatggttgcactgtt
ggattgggttacattgaccttactaagagagtgtttgggttggctgagtttctagatgat
agccacttcacaaatgtggaatcaactttgattgggcttggttgcagggaatgccttctc
ccagtggatgttgtcaggtctactgaaggaaaagggttggttgatgcattatcaagatgt
ggtgtgatggtaactgagaggaaaaaatctgattttaaggcaagagatctggtgccagat
cttggaaggctcgtcaaaggttcgattgagccagttcgtgatcttgttttaggacttgaa
atagcccctgctgctttgggcgctttattatcttatgcagaattgctttcagatgaaagc
aattatggaaattttgctattaagccttataatcttgacagttgcatgaggctagactct
gctgctatgagagcattaaatgttatggagagcagaaacgatgctaacaaaaattttagc
ttgtttggtctgatgaatagaacttgtactgctggaatggggaaacggttgcttcatatg
tggctgaagcaacctttattagatgtgaatgaaataaatgctcggctggatttggtacaa
gcttttgttgaggatatagaacttcgtcaggatcttagacaacatttgaaaagaatatct
gatattgaacgactaacacgtaatcttcagaagaaaagagctggtttgcaaaatgttgta
aagctttatcagtcaagcattagacttccatacattttaagtgcactgggaaggtatgaa
ggacagttctcagcattaatgaaggaaagattctcggatccccttggaatctgtagtgat
gatgatcatttaaacaaatttgtggcccttgttgagacttctgttgaccttgaccaactt
gagaatggtgaatacatgatatcctctggttatgattcaaggctccttgaactgaaagag
gaacaagagtcgcttgattcccaaatagatagtcttcatataaaaactgccaatgatctt
gatctcagtgctgacaaggttctaaagctagagaagggtacacaatttggacatgttttt
agaataacaaagaaggaagaaccaaaaatcaggaaaaagcttactacacagtttgttgtt
cttgaaacacggaaggatggtgtcaaatttacaaattcaaaactcaaaaatttaggggat
cagtatcaaagggttctcgaggaatataaaaactgccaaaaggaattagtacagcgagtg
gttcagactgctgctacattttctgaggtattcgagtctttagcttcattactagctgaa
ctggatgtgttgcttggttttgctgatttggcagcaagttgtcctactccctatacaaga
ccagatataactccatctgatgttggagatatcatattagaaggcagtagacatccctgt
gttgaggcacaggactgggtgaatttcataccgaatgactgtaagcttgtccgaggacaa
agctggttccaaattatcactgggcccaacatgggtggaaaatccactttcatcagacag
gttggtgtaaatattttaatggcacaagttggatcatatgttccttgtgacaacgccata
atttctgttcgtgattgcatatttgcccgtgtaggtgctggtgactgccaattgcgagga
gtgtccacttttatgcaagaaatgcttgagactgcatcaattttgaagggagccactgat
aagtcactgataattattgatgagttgggccgagggacatctacttatgatggatttggc
ctagcttgggcaatttgtgagcacattgttgatgtcatcaaggcacctactttatttgct
acccactttcatgaactcacgacattagcccatgataacagaggggctggaccttccaat
aaaaagagtgctggtatagcaaattaccacgtcagtgcacacatagattcatcaagccgc
aagttgactatgctctacaaggttgaagagggggcttgtgatcaaagttttggcattcat
gttgcagaatttgccaattttccagaaacagtagtatctcttgcaagagaaaaagctgct
gagttggaagatttctctcctgccacaaaaaatgctgatgatctttcaaaagaggtggga
cagaagcggaaaagggagtttgatcccgatgctgtctctgagggtgcagcaagggctcac
caattcttgaaagagtttgctgagattccattagagacaatggatttggagaaagcattg
gagcatgtgaataaaatgaagagtgacttggagaaggattcagaaaactgtcagtggttg
aagcagtttctttag
DBGET
integrated database retrieval system
