Spinacia oleracea (spinach): 110789560
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Entry
110789560 CDS
T05137
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soe04131
]
110789560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soe04147
]
110789560
Membrane trafficking [BR:
soe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110789560
Exosome [BR:
soe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110789560
Exosomal proteins of bladder cancer cells
110789560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
TPR_COPA_B
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_Aladin
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_ACSF4
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
110789560
NCBI-ProteinID:
XP_021849948
UniProt:
A0A9R0IJ73
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Position
4:complement(145224503..145231951)
Genome browser
AA seq
1212 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCATFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLLR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREQDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFYVSGDAMFYAKDRFLRFYEFSTQRDSQVIPIRRPG
TASLNQGPRTLSYSPTENAVLVCSDVDGGSYELYVVPKDSFGRGDMAQEAKRGVGGSAVF
IARNKFAVLDKSSNQVLVKNLKNETGKKSVLPIATDAIFYAGTGNLLCRAEDKVVIFDLQ
QRSVLGELQTPFVKYVVWSNDMESVALLSKHAIVIASKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVSGNTIFCLDRDGKNKAIVIDATEYL
FKLSLSRQKYDHVMNMIRSSQLVGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLMTGNVEKLNK
MLKIAEVKNDVMGQFHNALYLGNVEERVKILEDAGHLPLAYITASVHGLHDVAERLATEL
GDDVPSLPEGKVPCLLTPPAPVMCAGDWPLLRVNKGRFSELDGVNRAEDEEDIEGDEWSN
ELKINDDGNVEEGEATELLSDGEIADENEEPGWEDLDLPPELDTPKASMSDRSSAIFVAP
TPGMPVSQIWTQRSSLAAEHAAAGNFDTAMRLLSRQLGIKNFTPLKPMFLDLHSGSHSYI
RAVESAPVISVALERGWTESASPNVRSPPALVYQFSELEEKLHVGYKSTTSGKFSDALGT
FLAILHTIPLVVVESRKEVDDVKELINIVKDYVLGLKMETKRRELKDDPKRQQELAAYFT
HCNLQSVHLKLALQNAMTVCFKAKNLGTASSFARRLLETNPGAQQSKLARQVVQATEKNM
SNAVELDYDFRNPFVICGATYVPIYRGQKDVSCPYCTARFVPSQEGQICNVCELAVIGAD
ASGLLCSPSQVR
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgagacaaagagtaacagggttaagggactcagtttccatactaag
aggccatggatcttggcgagtcttcacagtggtgtgatccagctatgggattacagaatg
ggtacacttattgatcgatttgatgagcatgatggccctgttcgtggtgttcatttccat
aaatctcagccactgtttgtgtcaggaggtgatgattacaagattaaagtttggaactat
aaacttcacaggtgtctatttacactactggggcaccttgattacattcgtacggtgcag
tttcaccatgaaaacccatggattgtgagtgccagtgatgaccagactattcgcatatgg
aactggcagtcacggacatgtatctctgtcttgacaggacacaatcattatgttatgtgt
gccacatttcatcctaaagaagaccttgttgtgtcagcttcccttgaccagactgtccgc
gtctgggatatcggggcactaaaaaagaaaagtgcgtctcctgccgatgatttgttgcgg
ttaagtcagatgaatactgatctttttggtggtgttgatgctgtggtcaagtatgtcttg
gaaggtcatgacaggggggttaactgggcttcatttcatcctactcttcccttgattgtg
tctggagctgatgaccgccaagtgaaattgtggcgtatgaatgataccaaagcttgggag
gtggacacattgagaggacacatgaacaatgtctcctgtgttatgttccatgccaaacag
gatattattgtttcaaactcagaagacaaaagtattcgtgtctgggatgtaacaaagcgg
accggcattcagacatttcgtagggagcaagatagattttggattcttgcagctcatcct
gagatgaatctcttagctgctggtcatgatagtgggatgattgtcttcaaattggagaga
gagcgtcctgcattttatgtgagtggtgacgcgatgttttatgcaaaagatcgtttcttg
cggttttacgaattttcaacacaacgagatagtcaagttatccctattcgccggcctggc
actgcaagcttgaatcagggtcctcggactctttcctatagtcctacagagaatgctgtc
cttgtatgttctgatgttgacggtgggtcttatgagctctatgttgtacctaaagattcg
tttggcaggggtgatatggcacaagaggcaaaaagaggtgttggaggatctgctgttttc
attgctcgtaacaagtttgcagtgcttgacaagagcagcaaccaagtcctggtaaaaaat
ctgaagaatgagactgggaaaaagagtgtcctccctattgccactgatgcaatattctat
gctggtacgggtaacttgctctgtagggcagaggataaggttgttatatttgaccttcaa
caaaggagtgttcttggtgagcttcaaaccccttttgtgaagtatgttgtctggtcaaat
gacatggagagtgttgctttgttgagcaaacacgctattgtgatcgcaagtaaaaagctt
gtccaccagtgcactcttcatgagacaattcgagttaaaagtggagcctgggatgataat
ggagtcttcatctatacaactcttaatcacatcaagtattgtcttcctaatggagatagt
ggcattattaaaacgcttgatgtcccaatttacatcaccaaggtttctgggaatacaatt
ttttgtttggatcgggatggaaagaacaaggccatagttatcgatgcaacagagtatctt
ttcaagctatctctgtcgaggcagaagtatgaccatgtgatgaacatgataagaagctct
cagcttgtggggcaggcaatgatagcttatttgcagcagaaaggatttcctgaagttgcc
ttgcattttgtaaaagatgagaggacccgtttcaatttagctctggagagtggaaacatt
caaattgctgttgcttcagcgaaagaaattgacgagaaagatcactggtatagactaggg
gtggaggctcttcgccagggtaatgctggtattgtagaatatgcttaccagaggaccaaa
aattttgagaggctgtcttttctttatctaatgacagggaacgtagaaaaattgaacaaa
atgttgaaaattgctgaggtaaagaatgatgtgatgggtcagtttcacaatgccctttat
ttgggcaacgtggaggagcgtgtgaagattttagaggatgctgggcatttgcctctggct
tacatcactgcttcagtccatgggctgcatgatgttgctgagaggctagctactgagttg
ggagatgatgttccctccttgcctgaaggtaaggtgccttgccttttgacacctccagca
cctgttatgtgtgctggagattggcccctattgagagtgaataaggggcggttcagtgag
ttggacggtgtgaacagggctgaagatgaagaagatattgaaggtgatgagtggagtaac
gagttgaaaataaatgatgatggcaatgtagaagaaggggaggctacggaacttttgagt
gacggggaaatagctgacgaaaatgaggaaccaggatgggaagacttggatcttccccca
gagctagatactccaaaagcttctatgagtgaccgtagttcagcaatatttgttgctcca
actcctggaatgccagtcagtcaaatctggacccaaaggtcatctcttgctgctgagcat
gcagctgctggaaatttcgatactgcaatgaggttgctaagtcggcaacttggaataaaa
aattttactcctttgaaaccaatgttcctagatcttcattctggtagtcacagttatata
cgtgcggttgaatctgctcctgttatttctgtggctttggaaaggggttggactgagtca
gccagtcctaatgtgagaagcccaccagctttagtgtatcaattctccgaattagaagag
aaactgcatgttggttacaagtccacaacctctggtaaattttcggatgcccttgggacc
ttcttagctatacttcatacaattcctctggtagttgtagagtccagaaaagaagttgat
gatgttaaggagctgattaacatagtaaaagattatgtgttgggtctcaagatggaaact
aagagaagggagctgaaagacgatccaaaacgtcagcaggagcttgctgcttatttcact
cattgcaatcttcaatctgttcatttgaagctggccctgcaaaatgctatgaccgtatgc
ttcaaggcaaagaatcttggcacagcttctagctttgccagacggctacttgagacaaac
cccggtgcccaacagtccaagcttgcccgacaagttgtacaggctacggagaagaacatg
agtaatgcagttgaattggactatgactttagaaatccttttgtaatatgtggggccacc
tatgtgccaatttatcgtggtcagaaagacgtctcctgtccttactgtactgcacggttt
gtgccaagccaggaggggcaaatctgtaatgtatgtgagctagctgtgattggagcagat
gcatcgggtttgctttgttccccatctcaggtaagatga
DBGET
integrated database retrieval system
