KEGG   Spinacia oleracea (spinach): 110789644
Entry
110789644         CDS       T05137                                 
Name
(RefSeq) protein RDM16 isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110789644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soe03041]
    110789644
Spliceosome [BR:soe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    110789644
SSDB
Motif
Pfam: PRP3 Prp3_C DUF7059
Other DBs
NCBI-GeneID: 110789644
NCBI-ProteinID: XP_021850033
UniProt: A0A9R0IIQ1
LinkDB
Position
1:complement(96981701..96988563)
AA seq 849 aa
MEKATEKEKSSRKSREERETTEHKHRHHRSRHRHRYEDEEDDDEHRRSRREKSHDDEHHH
RHHHKSREYSVDEQGDEEEDARDSRRGREGSRDKDKDRKKRKDREVSEERIDDKRAKVSD
VKKERRRFDDDDNGRIVKDERKEKRRFEDDGNGRVKIEEAKTKKEDGGRGDGSGEIVDNN
NGRKRDRRRFEDGDVKKESVAEPTGRSGSFPNDGAEKSLNVSSRFSSETFPANNHTATKV
SSISTTHENKGVNITGSHAVTGKSSTDGTPSTAGKTGNISLDALAKAKKALQMQKELAAK
MKKIPLLNRGTSSSNAVNAQVGSKEEIKPPSAAGIQQTPSTSTFPPAAASAKTASMIDPA
KYEAVKRAQELAAKMGFRQDTEFAPLINLFPGQLPLDTTALQKPAKAPVLRLDAHGREVD
EDGNVVYISKPSSLSTLKVNINKQKKDAFQIHKPELEVDPDKNPHFDPRMGIDKTKLLRP
KRMNFLFVEEGKWSKDAEIIKLKSQFGEAQAKELKAKQAQLARAKAEPNINPNLIEVSER
VITKKEPKESIPEVEWWDVPLLRSGDYADIADGSSIEDRVKMEKITIYLEHPRPIEPPAE
PAPPQPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNIMRVLASEA
TQDPTKMEMEVRTAAAEREQAHVDRNIARKLTPAERREKKERKLFEDPNTLETIVSVYKI
NDFSHPQNRFKVDINAQENRLTGCAVISEGFSVVVVEGGSKSIKRYGKLMLRRINWLAKV
LNEDGEEDEDEEKPPNKCSLVWQGSVAKPSFNRFFIHDCRTEAAARKVFSDAGVGHYWEL
AANFVDDQI
NT seq 2550 nt   +upstreamnt  +downstreamnt
atggaaaaggcgacggagaaggagaaaagcagtcggaaatcgagggaggagagagaaact
acagagcacaagcaccgtcaccacagatctaggcatcgccaccgctatgaagacgaggaa
gacgacgatgagcaccgtcgatctaggagagagaaatctcacgacgacgaacaccaccac
cgtcaccatcataaatcgagggagtactccgtggatgagcagggggatgaggaggaagat
gctcgtgattcgaggagagggagggaaggcagtagggataaggataaggatagaaagaag
aggaaggatagggaggtgagtgaggagaggattgatgacaagagggctaaggtttctgat
gtcaagaaggagaggcgtcgttttgatgacgacgataatggtagaattgttaaggatgaa
aggaaagagaagaggagatttgaggatgatggaaatggtagggttaagattgaagaagct
aagacgaagaaagaagatggcggccgcggcgatggcagtggggagattgttgataataat
aatggcaggaagagggataggagaagatttgaagatggtgatgttaagaaagaaagtgtt
gcagagcctactggcaggagtggttcctttccaaacgatggtgctgagaaatcactcaat
gtgtcatcaagattttcatctgaaacattccccgcaaataaccatactgccaccaaggta
tcttcaatttctaccacccatgaaaataagggagttaatattaccggatctcatgcggtt
actggaaaatctagtacagatggaacaccttcaactgctggcaagactggaaatatatcc
cttgatgctttagcaaaagctaagaaagctttacagatgcagaaggaactcgctgcaaaa
atgaagaagattcctttgctaaacagaggtactagctcaagcaatgctgtcaatgctcaa
gtgggctcgaaagaagaaattaaaccacctagtgctgctgggattcagcagacaccatca
acatctacctttcccccagctgctgcttctgctaagacggctagcatgatagaccctgcc
aaatatgaagctgtgaagcgtgcacaagaacttgctgccaagatggggtttcgccaggat
acagaatttgctcctttgataaatttgttccctgggcagttgccacttgatactaccgcg
cttcaaaagcctgcaaaggctccagttcttcggttggatgctcacggtagggaagttgat
gaggatggaaatgttgtctacatttctaaaccaagcagtctaagtacccttaaggtgaat
attaacaagcagaaaaaagatgcattccagattcacaagccagaattggaagttgatcca
gataagaatcctcattttgatccaaggatgggtattgacaaaaccaagcttctcaggccc
aaaagaatgaatttcctgtttgttgaggaaggtaaatggtcaaaagacgctgagattatc
aaactgaagagtcaatttggagaagcccaagccaaggagcttaaggctaagcaggcacag
ctggctagggcaaaggcggagccaaacataaatccaaatttgattgaggtttcagaaaga
gttatcacaaagaaagagccaaaggagtctattccagaagttgaatggtgggatgtgcct
cttctgcgttctggtgattatgctgatattgctgatggtagcagcattgaagatagagtg
aagatggagaaaatcacgatctatcttgagcatccccgtcctattgaacctcctgcagag
ccagccccaccacaacctcaaccgcttaaacttacaaagaaggaacagaagaaactccgt
acacagcgtcgcttggcaaaggagaaggataggcaggagatgattaggcaaggtttaatc
gagccccccaaacctaaagttaaaatgagtaacatcatgagagtgttggcctctgaggca
acccaagacccaacgaaaatggagatggaagttcgaactgctgcagctgaacgtgagcag
gctcatgtggacaggaacattgctcgcaaactgacacctgctgagcggcgtgaaaagaaa
gagaggaagctgtttgaagatccaaatactttggaaactattgtttcagtgtacaagatc
aatgacttttcacacccacaaaataggttcaaagttgacatcaatgcgcaagagaaccgt
ttaactggttgcgctgtcatttctgagggttttagtgtcgtggttgttgaaggtggaagc
aaatccattaaaaggtatggaaagctgatgcttcggcggataaattggcttgccaaggtg
ttaaatgaggacggggaggaagatgaagatgaggaaaaaccaccaaataaatgttctctg
gtttggcaaggaagtgtggcaaaacctagttttaaccggttcttcatccatgattgcaga
actgaggctgctgcccgcaaagttttctctgatgctggtgttggccactactgggaattg
gctgcaaactttgtggatgatcagatataa

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