Spinacia oleracea (spinach): 110789811
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Entry
110789811 CDS
T05137
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110789811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110789811
03036 Chromosome and associated proteins [BR:
soe03036
]
110789811
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110789811
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110789811
PBAF complex
110789811
GBAF(ncBAF) complex
110789811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
110789811
NCBI-ProteinID:
XP_021850206
UniProt:
A0A9R0IIZ1
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Position
5:complement(122561930..122565915)
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AA seq
527 aa
AA seq
DB search
MENHETSPAKSTVNLTFHSREQQAQIQPPPPPPMEVQSPITTTSAFNTVSSLPPPSKSET
TPPPSKPETTPQPPDPKKSAPEPPDFVTVPSYSSWFKWNEIDECEVRHMPEFFTDNSASK
NPNVYKYYRNAIVKNFRSNPSKKLTFTEVRRWLVGDVGSIRRVFDFLDTWGLINYSPPSG
KPPFKWEEKEKEKETAKANAAAAAASPASQPSTGAAVVAAANSNVRKSNKLCSGCKVACT
IACFVCDKYDLVLCARCYVRGNYQVGVNSSEFRRVEINEPVKTDWTEKETLQLLEAVMHY
RDDWKRVAEHVGGRTDKECVARFIKLPFREKFAEPGGIGEDQVDSESGIEPPAKRMHLTP
LADASNPIMAQAAFLSALAGIEVSEAAARAAVSTLYDMDGLTSRGSGQLQAYSIKVQDPA
VESSGGSVACTPEEARVEAESLLKQEEDEFLKSIAIIIEAKMKEIQDKIDRFEEKDLQLE
REWHQLRQMQHQLYLDKLTLLFHKTSAPKSVENVSEGNVRTEFPTSS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccatgaaacctcccccgccaaatcaactgtcaacttgactttccattcacga
gagcagcaagcacaaatacaaccaccaccaccaccaccaatggaggtccaatcacccatc
accaccacctccgctttcaacactgtctcttctcttccgccgccctcaaagtctgaaacc
acccctccgccctcaaagcctgaaaccacccctcagccgccagatcctaaaaaatccgct
cctgaacctcccgatttcgtcaccgtcccaagctactcaagttggttcaaatggaacgag
atagacgagtgcgaggtgcggcatatgccggagttcttcacggataactcagcatcaaag
aaccctaatgtttacaaatattacaggaatgccattgtcaagaatttcaggtccaaccct
tctaaaaagctcacctttacagaagttaggaggtggcttgtcggagatgtggggtccatt
cgccgggtgtttgattttcttgacacgtggggccttatcaattactccccgccctctgga
aagccgcctttcaagtgggaggagaaggagaaagagaaagagaccgccaaggctaacgct
gccgctgcggccgcctctcctgcatcacaaccttctacaggggctgctgttgttgctgct
gcgaattccaatgttcggaaatcaaacaagctgtgcagtggctgcaaagttgcttgcact
attgcctgctttgtctgtgataagtatgacctggtgctctgtgctaggtgctatgttcgt
ggtaactaccaggttggtgttaattcttcagaattcaggcgggttgagattaatgaacca
gtgaagacagattggactgaaaaagaaactttgcaacttctggaagccgttatgcattat
cgtgatgactggaagcgtgtggctgaacatgttggtggtagaaccgacaaagaatgcgtt
gctcgttttattaagcttccctttcgggagaaatttgcggagcctggaggtataggtgag
gaccaagtggattctgaatctggaatagaaccccctgcaaagagaatgcatcttacacca
cttgctgatgctagcaacccaattatggctcaggctgcatttttgtcagctttggctggt
attgaggtttcagaagctgctgctagagcagcagtgtcaactctatatgacatggatggt
ctaacaagtaggggcagtggtcagttgcaggcctattcgataaaagtgcaagatcctgct
gttgaatccagtggtggttctgtagcttgtacaccagaagaagctcgtgtagaggcagag
tctctgctcaagcaggaggaggacgagtttttaaagtccatagcaatcattatcgaagct
aagatgaaagagatccaagataagattgatcgttttgaggaaaaggatttgcagttggaa
agggaatggcaccagttacgtcaaatgcaacaccagctttacctagataagctcactctt
ttatttcacaagacttctgcgcctaaatccgtagaaaatgtatcagagggaaatgtcaga
acagaatttcctacatctagttag
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