Spinacia oleracea (spinach): 110789854
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Entry
110789854 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110789854 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
soe04131
]
110789854
Membrane trafficking [BR:
soe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
110789854
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_IFT122_1st
Beta-prop_THOC3
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_RSE1_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_Prp19
Nbas_N
Beta-prop_WDR3_1st
ADDB_N
Motif
Other DBs
NCBI-GeneID:
110789854
NCBI-ProteinID:
XP_021850243
UniProt:
A0A9R0IJ38
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All DBs
Position
2:104078425..104094369
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AA seq
1117 aa
AA seq
DB search
MYMAYGWPHVMPIESGISLSSQRIIYLKVTNRLLLVVAPSHFELWSSSQYKVRLGKYKRD
SSSIQREGENIQAVWSPDSKLVAVLTSSFYLHIFKVQFTDKRIHIGGRQPSALFLANINL
VLNEQVPFSVKDLTVSNFVCDSKHLLIGLSNGSLYTISWKGEFCGASVIDFRVGESNEII
RAPDCFENGCATGRSPEVNHVDSTLSGLPSIVRLELSLLLRMLFILFSDGKLVLCSVSKR
GLKQTESIKAEKILGSGDSVCASVASDQQILAVGTRKGTVELYDLAGSASLMRIVSLYDW
GYSTEDTGPVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQVGLRSASSPVAKP
NPDRKYEPLMAGAATLHWDEYGYRLYAVEETSSERILAFSFGKCCLNRGVSGSTSVRQVI
YGEDRILLVQSEETDELKMLHLNLPVSYISQNWPVLHVAASFDGTFLAVAGLHGLILYDV
RLKKWRFFGDITQEQKIECKGLLWLGKIVVVCNYVGSSNTYELLFYPRYHLDQSSLLCKK
TLLTKPIVMDVYQDYILVAYHPFDVHIYHVKLSGELTPTSNPDLQLSTVRELSIMTAKSP
PASMRFIPDRFYKDYASVKHKSSEEPVRCLILRGNGELSLLDMNDGHELELTDSVELFWV
TCGQLDVKENLIEEISWLDYGHRGMQVWYPSPGADPFKQEDFLQLDPDLEFDREIYPLGL
LSNAGVVVGVCQRMSFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKIEEALKLAQLSAE
KPHFSHCLEWLLFTVFEAEISRQSLNKNQKAVSNHKPSRSLMEKTCDLIRNFPEYHNVVV
SVARKTDGRHWADLFFAAGRSTELFEECFQRRWYQIAVCYILVIAKLEGPAVSQYCALRL
LQATLDDSLYELAGELVRFLLRSGREYEQTPTEDGVSPRFLGYFLFSSKKQPFDSKTISP
HKEHSAHVASVRNILESHASYLMSGKELSKFVAFVKGTQFDVVEFLQRERYGCAHLENFA
SGLELIGQKLQMDTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLFDLFRHDARL
WKAYCVTLQSQPAFAEYHDLLEELEERLSSIPSFQEV
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatacggatggccgcatgtgatgccaattgaatcagggatttctctatct
tctcaacgaatcatttatctcaaagtcaccaatcgtttgttgctcgttgttgctccttct
catttcgagctttggagctcttctcagtataaggtgagactagggaagtataaaagagat
tcaagctcaatccagagagaaggtgagaatatacaggctgtgtggagtccagattcaaaa
ttggttgctgttcttacttcttctttctaccttcacatatttaaggtgcaattcactgat
aaaagaatacacattgggggaaggcagccatcagcactgtttcttgcaaatatcaatctt
gttttgaatgagcaggtccctttttctgtcaaggatttaacagtgagcaatttcgtatgt
gatagtaaacatttgctgattggactctctaatggatccttatatactatatcatggaaa
ggggagttctgtggtgcttctgttattgacttccgtgttggtgaaagtaatgagattatt
agagcacctgattgttttgaaaatggctgtgcaacaggaagaagtccagaagtaaatcat
gtagactcaacactatctggactcccttccattgtgagattggagctttcattgttgttg
aggatgctttttattcttttttctgatgggaaacttgtactctgctctgtaagcaaaagg
ggccttaagcaaaccgagtctataaaagcagaaaagatacttggttcaggagattctgtg
tgtgcttcagtagcttctgatcagcaaattcttgcagttggtaccagaaaagggactgtt
gagttgtatgacctagctggatctgcttcactaatgcgcattgtttccttgtatgattgg
gggtattccactgaggatactggtcccgtcagttgtattgcatggacgcctgataattcc
gcctttgcagtaggatggaagcttagaggacttactgtttggtctgtctcaggatgtcgt
ttaatgtctactattcgtcaagttggtttgagatccgcctcttcccctgtagctaagcca
aatcctgatcggaaatatgagcctttaatggctggtgcagctacactacactgggatgaa
tatggatacaggctgtatgcggtggaggaaacatcttcagagagaattcttgcattctcg
tttggtaaatgttgccttaacagaggagtttcaggctcaacatctgttcggcaggtgatc
tacggtgaagatcgtattcttcttgtgcagtctgaggagacagatgagcttaaaatgttg
caccttaatcttccagtctcttacatctcacagaattggccagttttacacgtggcagct
agttttgatggaacattcttggcagttgctggtcttcatgggttgatattgtatgatgta
cgtctaaaaaaatggcgattctttggagatattactcaagaacagaagattgagtgcaag
ggtttgttgtggctggggaaaattgttgttgtctgcaattatgtcggctcatctaacacg
tatgagttgctattttatcctagatatcaccttgatcaaagctcactattgtgtaaaaaa
acgttgctgacgaagccgatagtcatggatgtttatcaagattatatacttgtagcctat
cacccatttgatgtccatatataccatgtgaaattatctggtgaattgacccctacaagt
aatccagatttacagctttctacagtacgagagctgtccatcatgaccgcaaagagccct
ccggcatctatgcgattcataccagatcgattttataaggattatgcttcagtaaaacac
aagtcatctgaagagcctgtgagatgtttaatattacgtggaaatggggagctgtccctt
ctagatatgaatgatggacatgaactggagctgacagattctgttgaactgttttgggtt
acatgtggccaattagatgtcaaagaaaatctcattgaagaaatttcttggttggattat
ggtcatcgaggaatgcaggtgtggtatccatctccaggtgctgaccctttcaagcaagag
gacttcttgcagctggatcccgatctggaatttgatcgtgaaatctatcctctgggacta
ctttcaaatgctggagtagtggttggtgtttgccagagaatgtcattttctgcttgtaca
gagtttccatgttttgagccatctccccaagcacaaactatattgcattgcttgcttcgt
cacctccttcagagggacaagattgaggaagctttaaagttggcacaattatcagcagaa
aaaccccatttctcccattgtcttgaatggctcctatttacagtatttgaagctgaaatt
tcaaggcaaagcttgaacaaaaatcagaaggcagtctctaatcacaagcctagtagatct
cttatggagaagacatgtgacttgatcagaaattttcctgaatatcacaatgttgtcgtg
agtgttgctaggaaaacagatggtcgacactgggcagatttgttttttgcagctggtaga
tcaacagagttgtttgaggagtgtttccagagaagatggtaccaaattgccgtttgctac
attcttgtcattgcaaaacttgaaggtcctgccgtaagtcagtactgtgctttgcgcttg
ttacaggcaactcttgatgattctttgtatgaacttgccggggaactggtgaggtttttg
ctgagatctggaagagagtatgagcagacaccgacagaagatggggtttcacctagattc
ttgggttattttcttttctcttcaaagaagcagccttttgattccaagaccatcagcccg
cataaagaacatagtgctcacgtcgcttctgttaggaatattttggaaagccatgctagc
tatttaatgtcagggaaggagctgtcaaagtttgttgcttttgtgaagggcactcaattt
gatgtggtggaattcctccaacgagaaagatatggatgtgctcatttagaaaactttgct
tccggtcttgaactcattgggcaaaagcttcaaatggatacacttcaaagtcggttggat
gcagaatttctcttggctcacatgtgctctgtcaaattcaaagaatggattgttgtcctt
gccactctgttgagaagatctgaggtactctttgatttatttcggcatgatgcacgtcta
tggaaagcatattgtgttactctccagtcgcaacctgcatttgctgagtaccatgatttg
cttgaagaactggaagaaaggctctcatctattccaagttttcaggaggtatga
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