Spinacia oleracea (spinach): 110789885
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Entry
110789885 CDS
T05137
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110789885
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110789885
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
110789885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
DEXQc_Suv3
AAA_19
IstB_IS21
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110789885
NCBI-ProteinID:
XP_021850293
UniProt:
A0A9R0IJU8
LinkDB
All DBs
Position
5:complement(12478125..12529410)
Genome browser
AA seq
2092 aa
AA seq
DB search
MLLQLPRLTNSLREPFDIDRAYLHRKTILQSLSPPSNANSLDESELARKIVYDWEEASPE
VRQAYKHFIGAVVDLIDGEVVSDEFREVALTAYRLFSEQGDEDEDSRRIAEKKSELQKLL
GHAVSDGSIRKVVQLAQRLCSLQPRNNAATSNLDKNLVDDGVEFGFDLDFRHPSRFLLDI
PLEDEEILGPEDLTPSTSVYSDWPAADAAGNRFSNVGIKYDLKWLRESCDMIVRGSGSQL
SRDELAMTICRVLESDKPGEEIAGDLLDLVGDSAFETVQELILHRKQLVEAISYGLLVLR
SDKPSSNAQPRMPSYGTQVTVQTESEKQIDKLRRKEEKRHKRGVVQGIEDDFSSTNFSSL
LEASERKNLFDDVIGSGPGPQSLGISALPQGTVRKHFKGYEEVIIPPIPTAAMKPGERLI
EIKELDEFAQAAFHGYKSLNRIQSRIFQTVYNTNENILVCAPTGAGKTNIAMIAILHEIG
QHFKDGFLHKNEFKIVYVAPMKALAAEVTSTFSHRLAPLNMIVKELTGDMQLSKNELEAT
QMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQ
SMIRIVGLSATLPNYLEVAQFLRVNPDAGLFFFDSTYRPVPLAQQYIGISEKNYLARTEL
LNKICYYKVVDSLKQGHQAMVFVHSRKDTGKTAERLVELAREDNNLELFQNETHPQFHLI
RKDVMKSRNRELVGLFDSGLGIHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLP
AHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLSHYLRL
LTSQLPIESQFINSLKDNLNAEVALGTVTNVKEAYAWLGYTYLFIRMKMNPLAYGIGWDE
VVADPSLGLKQRALITDAARSLDKAKMMRFDEKSGNFYCTELGRIASHFYIHYSSVETYN
EMLKRHMSDSEVIDMVAHSSEFENIVVREEEQMELEGLARECPLEIKGGSSSKHGKISIL
IQLYISRGSIEAFSLISDAAYISASLARIMRALFEICLRRGWSEMTAFMLEYCKAVDRQI
WPHQHPLRQFDRDISLEILRKLEDRGADLDRLYDMEEKDIGALIRYVPGGKTVKQYLAMF
PTVLLSATVSPITRTVLKVDLLVTPDFIWKDRFHGTAQRWWILVEDSENDHIYHSELFTL
SKRTARGEPQKLSFTVPIFEPHPPQYYIRAVSDSWLQSESFYTISLHNLALPESHTSHTE
LLDLKPLPITSLGNRTYESLYRFSHFNPIQTQAFHILYHTDKNVLLGAPTGSGKTISAEL
AMFRLFNTQPDMKVIYIAPLKALVRERMNDWRKRLVTQLGKTMVEMTGDFTPDLMALLSA
DIIISTPEKWDGISRNWHTRSYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTE
RSVRFVGLSTALANAGNLGDWLGVDETGLYNFKPSVRPVPLEVHIQGYPGKFYCPRMNSM
NKPAYAAICSHSPTKPVLIFVSSRRQTRLTALDLIQYAASDEHPRKFLNISEEALQMILS
QITDQNLRHTLQFGIGLHHAGLNDKDRSAVEELFGNNKIQVLVSTSTLAWGVNLPAHLVI
IKGTEFFDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF
PVESSLREHLHNHFNAEIVSGTICHKEDAIHYLTWTYLYRRLTVNPAYYGLEDTNPAVLS
SYLSRLVQSTFEDLEDSGCIKMVEDSVESMILGSIASQYYLSYLTVSMFGSNLGPSLSLE
VLLHVLSAASEYDELPVRHNEENHNATLAEKLPYKVDKNRLDDPHVKANLLFQAHFSQLE
MSISDYMTDLKSVLDQSIRILQAMIDICANSGWLSSTLNCMHLMQMVMQGLWFDEGSSLQ
MLPCLNNNDVIPTLTRQGISNVQQLFDVPRATLQKLLGSFPASSLYQDLQRFPRIHVKLR
LKKKNERTGSSCSLNVRLENVNAKRKTPRAFTPRFPKVKDEAWWLVLGNTVSSELYALKR
VSFADHLVTHIDLPSDSVISQGLKLILVSDCYLGYELEYSLEELLKDQPRGA
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcagctccctcgactcacgaactctctccgcgagcctttcgatatcgatcgt
gcttatcttcaccgcaaaacaattctccaaagtctctctcctcctagtaatgcgaactcg
cttgatgagtcggagctagcccggaaaattgtatatgattgggaagaagcttctccggaa
gtgagacaagcgtataaacattttattggcgcggttgttgatttgattgatggagaagtc
gtgtctgatgagtttcgcgaggtggcattgactgcttatcgactctttagtgagcaagga
gatgaggatgaagatagccgaaggattgctgagaagaagtcagaattacagaaattactg
ggtcatgctgtttctgatggtagcatacggaaagtagtacaattggctcagagattatgt
agtctgcaacctagaaataatgcagccacgtcaaatttagataaaaatttggttgacgat
ggtgtagaatttggatttgatcttgattttagacatccttcacggtttctgttggatatt
cctttggaagatgaggaaattttggggccagaggacttgactccttcaacttcagtttac
agtgattggcctgcagctgatgctgctggtaatcgtttttcaaacgttgggattaagtat
gatttaaaatggttaagagagtcatgcgatatgatagtgcgaggaagtggctcacagctt
tctcgagatgaactggccatgacgatttgtcgggttcttgaatctgacaagccaggggaa
gagattgctggtgatttactggaccttgtcggggatagtgcttttgaaactgttcaggag
cttatcttgcacagaaaacagcttgttgaagcaattagttatggtctgctggtgttacgg
tctgataaaccttcttcaaatgctcaaccacgcatgcctagttatgggactcaggtcact
gtgcaaactgagtctgagaaacaaattgataaacttaggcgcaaagaggagaaacgacac
aagcgtggagttgtgcaagggattgaagatgacttttcatctacaaatttttcttcctta
ctggaagcaagtgagaggaaaaatctctttgacgatgtgattggaagtgggcccgggcct
cagtcattaggaatttctgcacttcctcaaggaacggtgagaaagcattttaaaggctat
gaagaagtcataattcctccaataccaacagctgcaatgaagcctggggaaagactgata
gagataaaagaattagatgaatttgctcaagctgcttttcatggatacaaatccctcaat
cgtatccagagcaggatcttccagacagtctacaacactaatgagaatattctagtatgt
gccccaacaggagctgggaaaacaaatatagctatgattgctattctgcatgagattgga
cagcatttcaaggatgggtttctgcacaaaaatgagttcaagattgtttatgttgctcca
atgaaggcattagctgctgaagtcacatcgacatttagccatcggttagctccactaaat
atgatagtaaaggagcttacaggagacatgcaactttctaagaatgagcttgaagcaact
cagatgatagtgaccacacctgagaaatgggacgtcatcacgcggaagagcagcgacatg
tcgctttcgatgctcgttaagcttttaataattgatgaagtgcaccttttgaatgatgat
agaggccctgttattgaagcactagttgctcgtacacttcgtcaggttgagtcgtcacaa
tccatgatccgcattgtgggtctttcagccactctacctaactatttggaggtggcacaa
tttttgagggtgaatccagacgcggggctctttttctttgattctacctaccgtcctgtg
cctcttgcacagcagtacattggtatcagtgagaaaaattatttggctcgcactgagttg
ctgaacaagatttgctactacaaggtagttgattccttaaagcaaggccaccaagcaatg
gtctttgtccattcacgcaaagatactgggaaaactgcagagagactggttgagcttgcc
cgggaggacaacaatctggagctttttcagaatgagacacatccacagtttcacttgata
aggaaggacgtcatgaagtctagaaacagagaattagttggactctttgattctgggcta
ggtattcatcatgctggaatgctacgttctgataggggtctcactgagagacttttttct
gatggattgttaaaggtgcttgtctgcacggcaactctggcatggggagtaaacttacct
gctcacactgttgtgatcaagggtacacaaatatatgatccaaaagccggtggctggcgg
gacctaggcatgcttgatgttatgcagatctttggacgtgctggaaggcctcagtttgac
aaaagtggggaaggcattattattacatctcatgagaagttatcccattacctgcggcta
cttactagccaactccctattgaaagtcagttcatcaactccttgaaggataatctgaat
gctgaggttgctctgggtactgtcacaaatgtgaaagaagcttatgcttggcttggttat
acctatctatttataaggatgaagatgaatccattggcttatggaattggatgggatgag
gtagttgcggatccttctttgggtttgaaacaaagagctttaataactgatgctgctcgt
tcccttgataaagcaaagatgatgcgttttgatgaaaaaagtggcaatttttactgcact
gagctgggtcgtattgcgagccatttctatatacattattccagtgtggaaacttacaat
gaaatgctgaaaaggcatatgagtgatagtgaggttattgacatggttgcacattcttct
gagttcgaaaatattgttgttagagaagaagaacaaatggaattagaaggtttagcacgt
gagtgccccttagaaataaaaggtggttcctccagtaaacacgggaaaatttctatcctc
attcagttatatatatcacgtggatccatagaggccttttcattgatttctgatgctgca
tatataagtgcaagtttggctcgtattatgcgtgctttgtttgagatttgcttgcggaga
ggatggtctgagatgacagctttcatgttagaatactgcaaggctgttgatcgtcagatc
tggccccaccagcatccactcagacaatttgacagagatatctccttagagattttgagg
aagctcgaagatcgaggggctgatctagatcgcctatatgatatggaggagaaggatatt
ggagctctgattcgttatgtacctggagggaagacagtgaagcaatatttggcaatgttt
ccaacggtcctgttgtccgctactgttagtcctatcacgagaactgttttaaaggttgat
ttgctcgtaacccctgatttcatatggaaggatcgtttccatggaactgctcagcggtgg
tggattcttgttgaggattctgaaaatgaccacatatatcattcagagcttttcacacta
tctaagcgaacagcaagaggggagcctcaaaagctttctttcactgtgccaatatttgaa
ccacatcccccacagtactatattcgcgctgtttctgattcttggctgcaatcagaatct
ttttacactatttctcttcacaatcttgcattgcccgagtctcacacttcccacactgaa
ttgcttgatttgaaacctcttccaataacctcacttggtaacagaacgtacgaatcctta
tacaggttttcacacttcaatccaattcagacacaggcttttcatatcctgtatcacaca
gacaaaaatgttcttttaggagctcctacaggaagtggaaaaactatatcagctgagctt
gcaatgtttcgtcttttcaatacacaacctgatatgaaggttatatatatagcacctttg
aaggcccttgtccgagaaagaatgaatgactggagaaaaagacttgtcactcagctgggg
aaaacgatggttgaaatgactggtgattttactccagacttaatggcccttctgtcagca
gatatcatcatttccactcctgaaaagtgggatggaattagccgtaactggcacactcga
agctatgttaaaaaggtagggcttatgattttggatgagattcacctacttggagctgat
cgtggaccaattcttgaggtcattgtctcaaggatgagatatatatcgtcacagacagaa
cgttcagtgcggtttgttggtttatcaacagctttagccaatgcagggaatttgggtgac
tggctgggtgtcgatgagacgggactctataatttcaagccaagcgtgcgaccagtacca
cttgaagtgcatattcagggataccctgggaaattctattgtccaaggatgaatagcatg
aacaaacctgcatatgctgctatctgttcgcactcacctacaaagccagttcttattttt
gtgtcctcacgtcgacaaacaagactgactgctttggacctaattcagtatgctgcatct
gatgagcatccaaggaagttcttgaatatttcagaagaagcactgcagatgattctatcc
caaattacagatcagaacctgaggcacaccttgcagtttggcattggtttgcatcatgct
ggattgaatgacaaggatcgatctgcagttgaagaactgtttgggaacaacaagattcag
gtattggtgtcaactagtacattggcttggggtgtgaaccttcctgcacatcttgtgatt
attaagggaacagaattttttgatgggaaaacaaaaagatatgttgattttcctataaca
gatatcttgcaaatgatgggtcgtgcaggtcgacctcaatatgaccagcatgggaaagca
gtcattttggttcatgaacccaaaaagagtttctataaaaagttcctttatgaacccttt
ccagtcgagagtagtctacgggagcatttgcataatcactttaatgcagaaattgtgtct
ggcacaatttgccacaaggaggatgcgatccactacttgacctggacttatctttaccga
agactgacggttaatccagcttattatggtttggaagacaccaatccagcggtcctgagc
tcgtacttgtctaggttggtgcaaagtacatttgaggatctggaagacagtggatgcatc
aaaatggttgaggatagtgtagaatctatgattctaggctcaattgcatctcaatattac
cttagttatttgactgtgtcaatgtttggctccaaccttggaccaagcctttctcttgaa
gttttgttgcatgtattatctgctgcttcagagtacgatgagctccctgtgcggcataat
gaggaaaaccacaatgcaacattggctgagaagcttccatacaaggtggacaagaatcgt
cttgatgatccacatgtaaaagcaaatttgcttttccaggcacacttttctcagttagag
atgtcaatcagcgactatatgacagatctaaagtctgttttggatcagagtatacgtata
cttcaggccatgatagatatatgtgctaatagtggatggctttctagcacacttaattgc
atgcatctaatgcagatggtcatgcagggtttatggttcgacgagggttcttctctacaa
atgttaccctgcttgaacaacaacgatgttattcctacactcacaagacaaggtatatca
aatgtgcagcaactatttgatgttcctagggcgactttgcagaagttgcttggaagtttc
ccagcttcaagtttatatcaggatttgcaaaggttccctcgcatacatgttaaactgaga
cttaagaaaaagaatgagagaactgggagttcctgttctctaaatgtgaggttggagaat
gtcaacgccaagcgaaagacaccaagagcatttacccctcggttccctaaggttaaagat
gaagcgtggtggcttgtacttggaaatactgtctcttctgagttatatgcattgaagaga
gtttcatttgctgaccatctggttacgcacatagatttgccatcagattcagtcataagc
caggggttgaaactaatcttggtctcagattgttatcttggttacgaactggagtactcc
ttggaagaacttctcaaagatcagccacgtggagcctaa
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integrated database retrieval system
