Spinacia oleracea (spinach): 110789895
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Entry
110789895 CDS
T05137
Name
(RefSeq) RING-H2 finger protein ATL43
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110789895
Enzymes [BR:
soe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110789895
Ubiquitin system [BR:
soe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110789895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_1
Prok-RING_4
zf-RING_16
zf-HC5HC2H
zf-RING-like
zf-HC5HC2H_2
RINGv
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
110789895
NCBI-ProteinID:
XP_021850305
UniProt:
A0A9R0JXP1
LinkDB
All DBs
Position
2:47803078..47805108
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AA seq
363 aa
AA seq
DB search
MKTSFTFLLLLLLSFFASVNCRYISPSPENPPPGNFSTFKPSIAVIVGVLTTLFSITFLL
LMYAKHCKQRVESSEPRSSYYYNNRGFPVAGRKNSGIDPVIIESLPVFRFASLQGEKDGL
ECAVCLNRFEPAEILRLLPKCKHAFHVECVDTWLDAHSTCPLCRFRVDPEDVLLVDRVTP
IEPDELGLPESTHRVSGRHSSAGEKGRAAGKGAATAQTTSSRRSLDGSISAVDRRKDGLL
LLTVDKDRRVEHKIIIDQGGAHERWSDVQPYDLFYLRSEMLMNEGRRSSSSSKRVQGNYH
GAKTQGMIFNTGGRNVINERSVSEITGLSRFSSRNTGRERHNGAIARWMAWISQSRPAVR
SGT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatcattcacatttctgttgttattattactttcgttttttgcttcagttaat
tgccgctatatctctccatcaccggaaaatccaccaccggggaacttctccacgtttaaa
cccagtatcgccgtcatcgtcggcgttctaacgacccttttttcaatcacttttttgctt
ctcatgtacgcaaagcactgtaagcagagagtagaatcgtcggagccgcgttcttcttat
tattataataacagaggttttccggtagctgggaggaagaattctggtattgacccggtg
attattgagtcattgccggttttccggtttgcttcattgcaaggggaaaaggacgggttg
gagtgcgctgtatgtttaaaccgattcgaaccggcggagattctccgacttttgccgaag
tgtaagcacgctttccacgttgagtgtgttgatacgtggcttgacgctcactctacgtgt
cctctttgccgttttcgggttgacccggaggatgtgctcctcgtcgaccgggtcacccca
atagaaccagacgaattgggattacctgagtcaactcaccgggtttcaggtcgtcactcg
tctgctggcgagaaaggacgagcagctggaaagggagctgccaccgctcaaacgacgtcg
tcaaggaggtcactagacggatcaatctcagccgtcgatcgaagaaaagacgggttgctc
ttactgaccgtcgataaggacaggagagtagagcacaagattataatcgaccagggtgga
gcccacgagaggtggagcgacgtacagccgtacgatcttttctacttgaggtcagagatg
ctgatgaatgagggccgtcgatcatcgtcgtcatcaaagcgggtgcaaggaaactaccat
ggagcgaagacgcaggggatgatttttaatacgggtggcagaaacgtaataaatgagaga
agtgtgtcggaaatcacggggttaagcaggttttccagcagaaatacaggaagagagaga
cataacggggctattgccaggtggatggcctggatttctcaatctaggccagctgtacgg
tcagggacttga
DBGET
integrated database retrieval system