Spinacia oleracea (spinach): 110790026
Help
Entry
110790026 CDS
T05137
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110790026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110790026
03016 Transfer RNA biogenesis [BR:
soe03016
]
110790026
Enzymes [BR:
soe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
110790026
Messenger RNA biogenesis [BR:
soe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
110790026
Transfer RNA biogenesis [BR:
soe03016
]
Prokaryotic type
tRNA degradation factors
110790026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
110790026
NCBI-ProteinID:
XP_021850460
UniProt:
A0A9R0IKY8
LinkDB
All DBs
Position
5:47498308..47526607
Genome browser
AA seq
911 aa
AA seq
DB search
MLANSISSLTHSCPHSSTLPSSHSKNCKILLSASALSRYRTFKTLASLHRLLPTNSHGKK
FNVRAMAQTHVSQKHAHDSLQPYSVKIPFGDRHILVETGHIGRQASGAVTVTDGETIVYT
TVCMSDIPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRPKDNEVLVCRLIDRPLRTT
MLKGFYHETQILSWVLSYDGLHPPDALAVTAAGIAVALSELPHTKPVAGVRVGLVGGKYI
VNPTTNEMENSELDLVVAGTDSAILMIEGYCNFLPEEKLLEAVEVGQDAVRAICKEVEAL
VEKCGKPKMIDAIKLPPPELYKHVEEIAGDELVHALQIKKKLPRRKALVSLEEKVVDILT
QRGYVGKSVATVIPETLPDLYVDEEEDEEVVVDGEVDEGDVHIKPSPKNCTPLLFSEVDV
KLVFKETTSKYLRKRIVEGGRRSDGRTSEGVRPINSRCGLLPRAHGSALFTRGETQALAV
VTLGDKQMAQRIDTLEGDDESKRFYLQYSFPPSCVGEAGRVGAPSRREIGHGTLAERALE
PILPSEDEFPYTVRVESNITESNGSSSMASVCGGSLALLDAGVPVKCPIAGIAMGMVLDT
KEFGGDGTPLILSDITGSEDASGDMDFKVAGNADCVTAFQMDIKVGGITLSVMKQALLQA
KDGRKIILAEMSKCLPPPSKTLSIYAPLIHVMKVRPEKVNLIIGSGGKTVRSIIEATGVE
AIDTQDDGTVKITARDLESLEKSKAMIANLTMVPTIGDIYRNCEIKSIAPYGAFVEIAPG
REGLCHISELSPSYLAKAEDAFKVGDRVDVKLIEVNEKGQLRLSRRALIPDTDPLVPSTK
ARPTTATQESSASKKVELTKVKVNASKEDVYPPGKVVRDGPFINKDRLKKGSKAMSNAPN
QSDSSVVNKEG
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaaattcaatatcttccttaactcattcttgcccacattcttctacacttcca
tcttcacattctaaaaactgcaagattcttctatctgcttctgctttgtctcgctataga
acttttaagactctcgcttctcttcaccgtcttcttccaacaaattcccatggaaaaaag
ttcaatgttagagctatggctcaaacccatgtttctcagaagcatgcccatgattccctt
caaccttactctgtcaaaatcccatttggagacagacatatcttggtcgagacaggtcat
attggtagacaagctagtggtgctgttacagtgacagatggtgaaacgattgtctatact
actgtttgtatgtctgatataccgagtgagccatcggattttttccctctttctgtaaat
tatcaagaacggttttcagcggctggtcgtacaagtggcggatttttcaaacgtgaaggg
aggccgaaggataacgaggttctagtttgtagacttattgataggccgttgcgtactact
atgcttaagggcttctaccatgaaactcagatcttatcttgggttttgagttatgatgga
ctgcaccctcctgatgctttggcggtcacagctgctggaatagcagtggcgctgtccgaa
ttaccgcatacaaagccagttgctggagtccgtgttggtcttgttgggggaaagtatatt
gtaaaccctacaactaatgagatggaaaattctgagttggatttagtagtagcaggcaca
gatagcgctatcctgatgatagagggctattgcaattttctcccagaagaaaagctgctg
gaagctgtagaagttggacaggatgcagtgcgggcaatttgcaaagaagtggaggctttg
gttgaaaagtgcgggaaacctaaaatgattgatgcgataaaattgcctcctccagagctg
tacaagcatgttgaggaaattgctggagatgaattggtacatgcactgcaaataaagaaa
aagttaccgagaaggaaggctcttgtgtcattggaagagaaagttgtagatattcttact
cagaggggctatgttggaaagagtgtggctactgtaattcccgagactctgccagatttg
tatgtggatgaggaggaagatgaggaagtggtagttgatggcgaagttgatgaaggtgat
gttcacataaagccatctccaaaaaattgcactcccttgttgttctctgaggtagatgtg
aagctggttttcaaagagactacctcaaagtacctgcgaaaacgtatagttgagggagga
cgaagaagtgatgggagaacttctgaaggggtacgtcctatcaattctagatgcggattg
cttcctagagcacatggaagtgctctattcacacgaggagagacacaggctttggcagtt
gtgacccttggtgacaaacaaatggcacaaagaatagataccctagagggtgacgatgag
tcaaagagattttaccttcagtactctttccccccatcatgtgttggagaggctggacga
gttggagcacctagtaggagagaaattggtcatggaacacttgcagagagagctcttgaa
cctatccttccctcagaagacgaatttccatatacagtacgtgttgagagtaacatcact
gaaagcaatggttcttcaagcatggcgtctgtttgtggaggatctttggcactactagat
gctggggttccagtgaagtgtccaattgcagggattgctatgggtatggtcttagataca
aaagaatttggaggtgatggaactcccctcattttatcagacataacaggttctgaagat
gcctctggggatatggacttcaaggtcgcaggaaatgctgattgtgttacagcattccaa
atggacataaaggttggaggtatcacattgtctgttatgaagcaagcacttctgcaggct
aaagatgggcggaagattattctagctgagatgtcgaaatgcttacctcctccgtcaaaa
acgctttctatatatgctccattaattcatgtcatgaaagtcagaccagagaaggttaac
cttataattggtagtggaggaaagacagtgaggagcattattgaagcaactggagttgaa
gcaattgacacacaagatgatggaacagtcaaaattactgcaagagatttggagagcctt
gagaaatcgaaggccatgattgctaatctgacaatggttcccaccatcggggatatttac
aggaattgtgaaatcaaatcaattgctccttatggtgcttttgttgagatagctccagga
cgtgaggggctttgccacataagtgaattgagtcccagttatctcgctaaagctgaagat
gcatttaaagttggagaccgggtcgatgtcaaacttattgaggtgaatgagaagggccag
cttcgccttagtcggcgtgctttgattcctgatacagatccactagtacccagcacaaag
gcgcgaccaactactgcaacccaagaaagttctgcttctaagaaagttgaattgacaaaa
gtcaaagtaaatgcttcaaaggaggatgtataccctccagggaaggttgttagagatggt
ccattcatcaacaaagataggctgaagaagggcagcaaagctatgagtaacgctcctaat
caaagtgatagtagtgtggtaaataaagagggctaa
DBGET
integrated database retrieval system
