Spinacia oleracea (spinach): 110790032
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Entry
110790032 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110790032
KO
K12816
pre-mRNA-processing factor 17
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110790032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110790032
Spliceosome [BR:
soe03041
]
Complex C
Other components
Step II factors
110790032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
WD_LRWD1
eIF2A
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
110790032
NCBI-ProteinID:
XP_021850469
UniProt:
A0A9R0IJG2
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All DBs
Position
5:47318796..47320670
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AA seq
576 aa
AA seq
DB search
MDLLQNYTNGGDDENDHDNDDEVSVISLPSKSAAPKVDSTALSLLSTSTAASAAARPLDP
TQHMVSYNPTYDQLWAPIHGPAHPYAKDGLAQGLRNHKLGFVENAAIDSFVFDEQYNTFH
TYGYAADPSASAVNNYVGDFNALEKNRATSVYNIPQSEQKRRRLEKKRENGEEDEVADKE
EVENPASDSWLVKNKISPWAGKKEGLPTELTEEQKKYADEYAKKKADEKGEKVEKGEVVV
DKTTFHGKEEKDYQGRPWISPPKDVKATNDHCYIPKRCVHTWSGHTKGVSAIRFFPKYGH
LILSAGMDTKVKIWDVFGSGKCMRTYMGHNKAVRDICFSNDGTKFLSAGYDKNIKYWDTE
TGQVISTFSTGKVPYVVKLNPDDDKQNVLLAGMSDKKIVQWDMNTGEITQEYDQHLGAVN
TITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPAISVHPNSNWLAAQSLD
NQILIYSTRERFQLNKKKRFAGHIAAGYACQVNFSPDGRFVMSGDGEGKMWFWDWKTCKV
FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggatctacttcaaaattatacaaacggcggcgatgacgaaaacgaccacgacaacgac
gacgaagtctcagttatatctctcccctcaaaatcagctgcaccgaaagtggacagcacg
gcactttctctcctctccacctccaccgccgcctccgccgccgccagacctctagacccg
acccaacatatggtgtcgtacaatcccacctacgaccaactctgggccccaatccacggc
cctgctcacccctacgctaaagatggtcttgctcagggtctgcgaaaccataaattaggg
tttgttgaaaacgctgccattgactcctttgtgttcgacgaacagtacaacacttttcac
acatatggttacgcggctgacccttctgcttctgctgttaacaattatgttggtgatttc
aacgctttggagaagaatcgggcgacttctgtgtataatatccctcagagcgaacagaag
cggcgccgcctcgagaaaaagagggagaacggggaggaggatgaggttgctgataaggag
gaggtggaaaatccggcttctgattcgtggttggtgaagaacaagatcagtccttgggcc
gggaagaaggagggtttgcccacggagttgactgaggagcagaagaagtatgcagacgag
tatgctaagaaaaaggcggacgaaaagggcgagaaagttgagaaaggtgaggttgttgtt
gataagactactttccatggaaaggaggagaaggattaccagggtaggccttggatctcg
cctcccaaagacgttaaagccaccaatgatcattgttatattccaaaacgatgtgtgcat
acttggagtggacataccaaaggggtttctgctattagatttttcccaaagtatgggcat
ttgattttgtcagctggaatggatactaaagttaagatttgggatgtttttggttctggg
aagtgtatgaggacttatatggggcataacaaagcggttcgggatatttgcttttcgaat
gatggaaccaagttcttgagtgctgggtatgataagaatatcaagtattgggatactgag
actggccaggtaatctctactttctctactggcaaagttccttatgttgttaagcttaat
cctgatgatgataaacagaatgtacttttagctggtatgagtgataagaaaattgtgcaa
tgggatatgaatactggtgagattacacaggagtatgatcagcatttaggggcggttaat
accatcacgtttgttgataataatcgaaggtttgttacatcgagtgatgataaatctctt
agagtgtgggagtatggtattcctgttgtgattaagtatattagtgagcctcatatgcat
tccatgccggctatttctgtgcaccctaattctaattggttggctgcccagagtttggat
aatcagattttgatttatagcactagggagcggtttcagcttaataagaagaagaggttt
gcagggcacattgctgccgggtatgcttgtcaggttaatttctcgcctgatggtaggttt
gttatgtcgggagatggtgagggtaagatgtggttttgggattggaagacttgtaaggtt
ttcaggacattgaaatgtcatgagggggtttgtattggatgcgagtggcatcccttagag
caaagcaaggtggcaacttgtggctgggatggactgatcaaatattggtaa
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