KEGG   Spinacia oleracea (spinach): 110790110
Entry
110790110         CDS       T05137                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110790110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soe03019]
    110790110
   03036 Chromosome and associated proteins [BR:soe03036]
    110790110
Messenger RNA biogenesis [BR:soe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110790110
Chromosome and associated proteins [BR:soe03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110790110
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_DCAF12 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 GH18_BT1044-like
Other DBs
NCBI-GeneID: 110790110
NCBI-ProteinID: XP_021850559
UniProt: A0A9R0IJM3
LinkDB
Position
2:84938140..84944775
AA seq 351 aa
MSNFTSLTNLGQNTNPNKSYEVPQPPTDSVSSLHFSPKANHLIATSWDNQVRCWEIMQSG
TNIHSAPKAAISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIK
DMAWIPEMNVLVTGSWDKTLRYWDLRQQNPVHTQQLPERCFSLTVRHPLMVVGTADRNIV
VFNLQNPQAEFKRIMSPLKYQTRCLAAFPDKQGFLIGSIEGRVGVHHLDDAQQTKNFTFK
CHRDNNDIYSVNSLNFHPAHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPISCSAFNN
DGSIFAYSSCYDWSKGAENHNPATAKSYIFLHLPQEAEVKGKPRVGNTNRR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgtcgaattttacatctcttacgaatttgggtcaaaatacaaatccaaataagtcatat
gaggtgcctcaaccaccaactgattctgtgtcaagccttcattttagtcccaaggctaat
catcttattgcaacttcatgggataatcaggtacgctgttgggagataatgcaaagtgga
actaacattcacagtgcaccgaaagcagctatatctcatgatcagccggttttatgctcc
gcttggaaggatgatggaacaactgtgttttcaggaggctgtgacaaacaggtgaagatg
tggcctttgttgtctggtgggcaacctgttactgtggctatgcatgatgcgcctattaaa
gatatggcctggattcctgagatgaatgttttggttactgggagctgggacaaaactctt
aggtactgggacttaaggcagcaaaatccggttcacacccaacaactcccagagcgctgc
ttttcattgactgtgagacatcctcttatggttgttggaacagcggatagaaatatcgta
gtgttcaatttgcagaaccctcaggctgaattcaaaaggataatgtctccacttaaatac
cagacaaggtgtcttgctgcatttcctgataagcaaggatttttgattggatcaatcgag
ggacgagttggagttcatcatctggatgatgcgcaacaaaccaaaaatttcactttcaaa
tgtcatagagacaacaatgacatttattctgtcaactctttgaacttccaccctgcacat
ggcacctttgcaactgcaggatctgatggtgcttttaatttttgggataaggacagtaaa
cagagactgaaggcgatgtcgagatgcaatcaaccaatatcttgcagtgccttcaacaat
gatggatccatatttgcatactcgtcatgttatgactggagtaaaggtgccgagaaccat
aacccagcaactgcaaagtcctacatatttttacacttaccacaggaggctgaggtgaaa
gggaagcctagagtgggcaacactaatcggcgatga

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