Spinacia oleracea (spinach): 110790110
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Entry
110790110 CDS
T05137
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110790110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110790110
03036 Chromosome and associated proteins [BR:
soe03036
]
110790110
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110790110
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110790110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
GH18_BT1044-like
Motif
Other DBs
NCBI-GeneID:
110790110
NCBI-ProteinID:
XP_021850559
UniProt:
A0A9R0IJM3
LinkDB
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Position
2:84938140..84944775
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AA seq
351 aa
AA seq
DB search
MSNFTSLTNLGQNTNPNKSYEVPQPPTDSVSSLHFSPKANHLIATSWDNQVRCWEIMQSG
TNIHSAPKAAISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIK
DMAWIPEMNVLVTGSWDKTLRYWDLRQQNPVHTQQLPERCFSLTVRHPLMVVGTADRNIV
VFNLQNPQAEFKRIMSPLKYQTRCLAAFPDKQGFLIGSIEGRVGVHHLDDAQQTKNFTFK
CHRDNNDIYSVNSLNFHPAHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPISCSAFNN
DGSIFAYSSCYDWSKGAENHNPATAKSYIFLHLPQEAEVKGKPRVGNTNRR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattttacatctcttacgaatttgggtcaaaatacaaatccaaataagtcatat
gaggtgcctcaaccaccaactgattctgtgtcaagccttcattttagtcccaaggctaat
catcttattgcaacttcatgggataatcaggtacgctgttgggagataatgcaaagtgga
actaacattcacagtgcaccgaaagcagctatatctcatgatcagccggttttatgctcc
gcttggaaggatgatggaacaactgtgttttcaggaggctgtgacaaacaggtgaagatg
tggcctttgttgtctggtgggcaacctgttactgtggctatgcatgatgcgcctattaaa
gatatggcctggattcctgagatgaatgttttggttactgggagctgggacaaaactctt
aggtactgggacttaaggcagcaaaatccggttcacacccaacaactcccagagcgctgc
ttttcattgactgtgagacatcctcttatggttgttggaacagcggatagaaatatcgta
gtgttcaatttgcagaaccctcaggctgaattcaaaaggataatgtctccacttaaatac
cagacaaggtgtcttgctgcatttcctgataagcaaggatttttgattggatcaatcgag
ggacgagttggagttcatcatctggatgatgcgcaacaaaccaaaaatttcactttcaaa
tgtcatagagacaacaatgacatttattctgtcaactctttgaacttccaccctgcacat
ggcacctttgcaactgcaggatctgatggtgcttttaatttttgggataaggacagtaaa
cagagactgaaggcgatgtcgagatgcaatcaaccaatatcttgcagtgccttcaacaat
gatggatccatatttgcatactcgtcatgttatgactggagtaaaggtgccgagaaccat
aacccagcaactgcaaagtcctacatatttttacacttaccacaggaggctgaggtgaaa
gggaagcctagagtgggcaacactaatcggcgatga
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