Spinacia oleracea (spinach): 110790690
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Entry
110790690 CDS
T05137
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110790690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110790690
Enzymes [BR:
soe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110790690
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
110790690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
DZR_2
Motif
Other DBs
NCBI-GeneID:
110790690
NCBI-ProteinID:
XP_021851158
UniProt:
A0A9R0IKS1
LinkDB
All DBs
Position
4:21306215..21329447
Genome browser
AA seq
1832 aa
AA seq
DB search
MEEASQGDSKVFSVRIVSIDHYMAPPIPDFDISYSSFQGENVKEVPVIRIFGATPAGQKA
CVHVHRALPYLYVPCSDIPLQLNTEGSIYENAVCFAVEKALKLKGNAGSKRQHVHHCSVV
RARKFYGYHSSEDLFVKINLYHPHDVSRAANLLLGGAVFEKCLQPYESHIPFLLQFLVDC
NLYGMGHMHLLKMKFRHPVPSDLLADNADSSYPEALVCKSSYSQADATASSHSFPLVWRS
STIPDEWKWQYPSVRGASSSHVNNMVKRQSICELEGDATVEDILNQQLKMYTSLSQTRSD
VRMVQSLVPIWEEEFERSGVHDAEILADPCRPPPQHVLKTLSNDVEYLDKLKGLYSNSES
SLLDTSDYVKSVLATQCLIEEGSIMGTGNQKSSELVSNPSEDVNIVHCGTSQHSVPADAV
DALLGKIEVNELDTLQVMEGVDTKGADPEDIALLKWLASSQAAEDMNSDDELHRDTILNP
LLPAATIDKVLEIVNTDYENESQQECQDILDSIVDVLNSDDNKGKRNCIGQDLSGPKIPQ
FDGAGDDNQLTPAASSPEKLDSESVSFKRHTFPICSSSFDDKKKRPKLQYGPLPLSEVQQ
FTGNIHSDPSTKNADSSGCCVVDLRTQLSCSVRDLMRKKRCIRIGSSGSGKSEVEEGSIK
DKNICHPRKLEFHTEPAEEKNLLAVEFPVSSHVQIDKQTKACEIGQSASTHCPGGKEKQG
IVNSSVADTQFVKVGSVEQYASMEEKESTGYISMTFHKKPPLASWKTGTSENSASIPVPS
NWCSVRDDSGDEGTSVQSGDPKDVRPFFTDSYKGVSEESNGFGDFCQDSLIGVPIHYLND
GSYSYMLTPAVSPPSVDSVLEWLALEEKGREHTRVKPLPDGSSQLPRTEPLNNRLDGENH
RTIDIEGCQMKAELFPSVDEGCFLREKDITKLSQDISQISGPSGQSKPTPLSQTGFRDPA
SVGAGQQLTLFSIEVQAESRGDLQPDPRHDTINIVVIAVQNDSGPSANIYVLLRDANEGC
GIGGRNLDGISGCRMLVFPEERDLLDKFISITCSIDPDILMGWDVQGSSLGFLAERASHL
GVSLINKISRIPSETKTVNKILDTSDKGNADAVSSDSLMSDIVLDDNKIIEDEWGRTHAS
GVHVTGRIVLNVWRLVRSEVKLNMYSLESVAEAVLRRKVPSIHWKILNKWFSSGPGKARF
RCIEYFMDRVNLNIDIVNQLDLINRTSELARVFGIDFFSVLSRGSQYRVESMLVRLAHTQ
NYVLISPGYQQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFSTCL
GNVVPSKADCLGVSSYSPDIHILKDLNQQILVTPNGVMYVPSQVCKGVLPRLLEEILSTR
VMVKQAMKSLAPSKKVLQRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCG
RRTLEHAISFVNTHDEWNARVLYGDTDSMFVLLKGRTLKEAFQIGNEIASMITAMNPNPV
KLKMEKVYQSCFLLTKKRYVGYSFESLNQLEPMFDAKGIETVRRDTCPAVAKIMEKSLRM
FFECKDITKVKAYLQRQWSRILSARVSIQDFVFAKEVRLGTYSTRTSSSLPPAAIVASKA
MRVDPRAEPRYAERVSYVVVHGEPGARLFDMVVDPQELLSMDSPYRLNDLYYITKQIIPA
LQRVFGLVGADLKQWFQEMPRPVRDAPAKQHFSAANSLRARIDYYYSSKHCVLCGELVQT
ANYFCEICSKKGPVTVAAMTGRTLKLERDIQHLVAICRHCGGGDWLVESGIKCTSLACSV
YYERRKVQKELRALSGIATEAGFYPRCMVEWF
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcatcgcagggcgactcaaaggtattcagcgttcgaatcgtttcgattgat
cactatatggctcctccaattcctgatttcgacatttcttacagcagtttccaaggtgaa
aatgtgaaggaggtgcctgttataagaatatttggcgctactcctgctggtcagaaggct
tgtgtgcacgttcatcgagctttaccgtatttatacgttccctgctcagatataccactc
cagttaaatacagaaggtagtatttatgagaatgctgtatgttttgctgttgagaaggct
ttgaagctcaagggcaatgctggttcaaaaaggcagcatgtgcaccattgctctgtagtc
cgtgcaaggaaattttatggttatcattcatcagaggatctttttgtaaagataaatctg
tatcatccacatgatgtctctcgtgctgctaatcttctgctgggtggtgctgtctttgaa
aagtgtttacaaccctatgaatcacatattcccttccttctccaatttctggttgactgc
aacttatatggcatgggccatatgcatcttttgaagatgaagtttcgtcatccagtgccc
agtgatctccttgctgataatgctgatagctcttatccggaagcgttggtttgcaagtct
tcttattctcaggcagatgcgacggctagttcacattcatttccactagtttggaggtct
tcaacaattccagatgaatggaagtggcaatatccttctgtgcgtggcgcttcatcaagc
catgttaacaacatggtgaagcgtcaaagcatatgcgaacttgagggggatgccactgtg
gaagacattttgaatcagcagttaaaaatgtacacatccctctcacaaactcgttcagat
gtgagaatggttcaatcgcttgttcctatttgggaggaagagtttgaaagaagtggagtt
catgatgcagagatactggctgacccttgtaggccacctcctcaacatgttttgaaaacc
ttgtcaaatgatgtcgaatatctggacaaactgaagggtttatatagcaactcagaaagc
agtttgttagatacatctgattatgtgaaatcggtgctggcgacacaatgtctaatagaa
gaggggagtataatgggaacaggaaaccaaaaatcaagtgagctagtatcaaatccctct
gaagacgtaaacatagtgcattgtgggacatcacagcattctgtgcctgctgatgctgtt
gatgcattattgggaaaaatagaagtgaatgaattggatactcttcaggtgatggaaggg
gtggatacaaagggtgcagatccagaggacatagcactactgaagtggctcgcttcttca
caggctgcagaggatatgaattcagatgatgaacttcaccgggataccattctaaatccc
ttgctgccagctgcaaccattgataaagtgttggagatagttaatacagattatgagaat
gaatctcagcaagagtgtcaggatatacttgattcaattgttgatgtgttaaattctgat
gataacaaaggaaagagaaattgtattggtcaagatttatctggcccaaaaataccgcag
ttcgatggcgctggagatgacaaccaattgactcctgctgctagttcacctgaaaaactg
gacagtgaatcggtgtctttcaagcgccatactttccccatttgtagctctagctttgac
gacaagaaaaaaaggcccaaattacaatatggtccattacctctgtctgaagtccagcag
tttactggcaatattcattctgacccttcaactaagaatgcagatagcagtggctgctgt
gtagttgacttgagaacacagctcagctgctctgtgcgagacttgatgaggaaaaagcga
tgcatccggattggatcatctgggtcaggaaaaagtgaggtggaagaaggttctataaag
gataagaacatttgtcatccacgaaagttggaatttcatacagagccagcagaagagaaa
aacttgctggctgttgaatttcctgtttctagtcatgtacagatagacaaacaaacaaaa
gcatgtgagattggacaatctgcctctactcattgtcctgggggaaaagaaaagcaaggt
atcgtgaactcatctgtagctgatacacaatttgtcaaagttggctctgtagaacagtat
gcatccatggaagagaaagagtccacaggatatatcagcatgaccttccacaagaaacct
cccttagctagttggaagactggcacatctgaaaactcagcatcaatacctgttccctcc
aattggtgttctgtcagagatgacagtggtgatgaaggaacatcagtgcagtctggggat
ccgaaagatgttcgtccattctttaccgattcctataaaggtgtatctgaggaatctaat
ggctttggtgacttctgtcaggattccctcataggagtaccaattcattatctaaatgat
ggctcttattcctatatgttgacaccagcagtttcacctccatcagttgattctgttctc
gaatggctagcgcttgaagaaaaaggtagagaacacacacgtgtgaagcccttacctgat
ggttcctctcaattacctcgtacggaacccttgaataatcggcttgacggagaaaatcac
agaactatagatattgaaggatgtcaaatgaaagctgagcttttcccaagtgttgatgaa
gggtgttttttgagagaaaaagatataacaaagttatcacaagacatctctcagatttca
ggacccagtgggcagtcaaagcctactcctctcagtcaaactggctttagagaccctgcc
agtgttggcgctggccaacagttgacactgttcagtatagaggtccaagcagaatctagg
ggagatcttcaacctgatccgcggcatgataccataaatatcgttgtcatagcagtccag
aatgatagtgggccgtctgccaacatttatgtacttctgcgtgatgcaaatgagggttgt
ggaattggtggaagaaacttggatggaatatctggatgcaggatgcttgttttccctgaa
gagagggacttgctagacaaatttataagtataacatgttcaattgatccagatatctta
atgggatgggatgttcaaggaagctcacttggatttttagctgagagggcttctcattta
ggtgttagcttaattaataagatctctcggataccatcagaaacaaagacagtcaataaa
atcctggatacttcggacaagggaaatgctgatgctgtatcttctgactctttgatgtct
gatattgttcttgacgacaataaaataattgaggatgaatggggtagaacccatgcaagt
ggtgtccatgtaactggaagaatagtcctcaatgtttggagactcgtgcgtagcgaagtt
aaattaaatatgtattccctagaatctgtggcagaagctgttttgaggcgaaaggttcca
tcgattcattggaagatattgaacaagtggttttcaagtggtccagggaaagcaagattc
agatgcattgagtattttatggatagggtaaacttgaacattgatattgttaaccaactt
gatttgataaaccgcacatcagagctagctcgtgtttttggaatcgactttttttctgtt
ttatctcgtggctctcagtatcgtgttgaatccatgcttgtaagattggctcatacacag
aattatgtccttatttctccagggtatcaacaggtagcctctcaacctgcaatggagtgc
ctaccgcttgtaatggaaccagaatctggtttctactcagatccagtcgtcgttttggat
tttcagtcactctatccatccatgataattgcatacaatctctgtttttctacctgcctc
ggcaatgttgtcccttcaaaagcagattgccttggggtcagctcatactcgccagatatt
catattttgaaggatttaaatcaacagatactggttacccctaatggtgttatgtatgtg
ccttctcaggtgtgtaaaggtgttctacctcgactgttggaggaaattttgtcaactagg
gttatggtgaagcaagcaatgaagtcgctggcaccttcaaagaaagttcttcagaggata
tttaatgctagacaacttgctttaaagctaatagcaaatgttacttacggatacacagct
gctggatttagtggtcgcatgccttgtgcagagctggcagacagcattgttcagtgtggt
cgtaggactcttgaacatgctatttcatttgtcaatacacatgatgaatggaatgctaga
gttctctacggtgataccgacagcatgtttgttcttcttaaagggcgcaccttgaaagag
gcttttcaaattgggaatgagatagcttccatgattacagcaatgaacccaaatccagtc
aaattgaagatggagaaagtctatcagtcctgctttcttcttactaaaaagcgatatgtt
ggatacagttttgagagcctcaatcaactagaacctatgtttgatgctaaaggcattgag
acagttcgcagagacacatgtcctgctgttgcaaagattatggagaagtcactaagaatg
ttttttgaatgcaaggatattaccaaggttaaagcttatctacagcgccaatggtccaga
atcctctcagcaagagtgtccattcaagattttgtctttgcaaaagaggtccggttgggc
acctacagtacaaggacttcatcatcactgcctccagcagcaattgttgcctctaaagca
atgagagtggatccaagagcagaacctcgatatgctgaacgtgtctcttatgttgttgtc
catggagagcctggtgcccgtttgtttgacatggttgttgatccacaggaactcttgtcc
atggactctccatacagactgaatgatttgtattacatcacaaagcagataataccagca
ttacagcgggtatttgggcttgttggtgctgatttaaagcagtggtttcaggagatgcct
cggcctgttagggatgctcctgcaaagcaacactttagtgctgcaaattctcttcgagct
agaattgattattactattcctcaaaacattgtgtactctgtggagaacttgtccaaaca
gctaactatttttgtgagatatgttccaagaagggtcctgttactgttgcagctatgacg
ggaagaaccttgaaattggagagggatatccaacaccttgttgctatttgtcggcattgt
ggaggcggagattggctggtagaaagtggtatcaagtgtacctcacttgcatgttcagta
tactatgagaggcggaaagttcagaaagagctgcgggctctctctggtattgcaactgaa
gcgggattttatcctaggtgtatggtggagtggttctga
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integrated database retrieval system
