Spinacia oleracea (spinach): 110790856
Help
Entry
110790856 CDS
T05137
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110790856
Spliceosome [BR:
soe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110790856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
SCAN
Motif
Other DBs
NCBI-GeneID:
110790856
NCBI-ProteinID:
XP_021851309
UniProt:
A0A9R0IL20
LinkDB
All DBs
Position
4:167077376..167081497
Genome browser
AA seq
810 aa
AA seq
DB search
MLVVNLTKAQELQYPLSLLNLVPPPSLLSNPNKFSSFSLPTRHLNPPPPHQKTTSISCRT
TPRTAAGTSIKHLAGKEREPDSGTENGSVSDEEERESMGLQGYDMGWDNGEVRKNLGGVQ
FESPVVEVKELEELPENWRRSKLAWLCKELPSQKRPTQFRLLNAQKKWVRQEDATYIAHH
FLRIRVNDSAFAVYRWMIQQHWFRFDFALATKLADCIGRERKFAKCREIFDDIINQGRVP
SESTFHILIVAYLSNPGEDCLKEACEIYNRMIHLGAYRPRLSLHNALFRALISTPAKSVK
QYLKQTEFIFHNLVTCGLEIHVDIYGGLLWVHSHQDIIDKERIFFLLKEMHMKGIPDTKD
TLLSILRACSKLGDVDEAEKTWLKLLKFDGGISSQAYVYKMSVYAEVGDSVKSLEIFREM
QEQFEQINIVAYQKIIEIMCNNQKVEFAESLKKELVGSGQKSLTPSYVDLLNMYYKLSLH
DKVESTFLECIGKCRPNRAIYGIYLDSLVKTSNIEMAESIFNQMLENEAISISSRSCNTL
LSGYLSCGDNVKAEKLYKFMRQKKYEVESTLMEKLDYLFTSTKKVIKNSLTLKLTTEQRE
ILVGLFLGGLQIEYAGEKKQHFVHFKFKDNSGIHSILKRHIYNEFHEWLQHSNGSTDDID
DDDDDDIPSNFSTIPHTCFGFYALQFWEDGKQSIPKLIHRWLSPRVLAYWFMYGGYTTPS
GDILLKVKGSKSDVERVFKALKSKSLDFRVKQKGRVFWLGFMGSHSTCFWRLIEPYLLDD
LQDFIKADEQTSENLTAEKSSIWSSTESDS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtgaacctaaccaaagctcaagagttacaatatccactctctctcctcaac
cttgttcctcctccttcactcctctcaaaccccaataaattctcctctttctctctccca
acccgccacctcaatccaccaccaccccatcaaaaaaccacctcaatttcatgccgtact
acacccagaaccgccgcgggaacttccatcaaacacttggcgggcaaagaaagagaacct
gattccggtacggaaaacggtagtgtttccgatgaggaggagagagaatcaatggggtta
cagggctatgatatggggtgggataatggtgaagtaaggaagaatctcggtggtgtacag
ttcgagtcgccggtggtggaggtgaaggaattggaggagttgccggagaattggcggcgg
tcgaagttggcttggctttgtaaagagttgccttctcaaaaacggcctactcaatttcgc
cttctcaatgctcagaagaaatgggtgcggcaggaggatgctacttatattgctcatcat
tttctgcgaattcgggttaatgattctgcatttgcggtgtacaggtggatgatccagcaa
cactggtttcgatttgattttgctctggctaccaagcttgctgattgcattggtagagag
aggaaatttgcgaaatgtcgggagatttttgatgatataatcaatcaaggacgggtgcct
agtgagtcaacatttcatatcttgattgttgcatatcttagtaacccaggtgaggactgc
cttaaggaagcatgtgaaatttacaatcgcatgatacatttgggagcatatcgtcctcga
cttagtctgcataacgctcttttcagagctcttattagtacacctgcaaagtctgtgaag
cagtatcttaaacagacagagttcatttttcataacctcgtaacttgtggattagaaata
catgtggatatttacggtggtctcctttgggttcatagccatcaggatatcattgacaaa
gaacgaatatttttcctgttgaaggagatgcatatgaagggaattccagatacaaaagat
actctcttatctattctgagggcttgttctaaattaggcgatgtagatgaagcagaaaag
acctggctcaaacttctgaaatttgatggtggcatttcttctcaagcttatgtgtataaa
atgagtgtctatgccgaggttggggattccgtgaaatctttggagatatttagagagatg
caggaacaatttgaacagataaatattgtggcgtatcagaagataatagagattatgtgt
aataatcaaaaggtggagtttgccgagtctcttaagaaagagcttgttgggagtggtcaa
aagtctcttacaccatcttatgtggatcttttgaatatgtactacaaattaagcttacat
gataaagtcgagtccaccttcttggaatgcataggaaaatgccgcccaaatcgagctatc
tatggtatatacttggactcattggtgaaaactagcaatattgaaatggcagagagcatc
ttcaaccagatgttagagaatgaggctataagtatcagtagcaggtcatgtaataccctt
ttaagtgggtacctatcttgtggggataatgtaaaggctgaaaaactctataagttcatg
cggcagaagaaatatgaggttgagtccactttaatggagaaactggactacctttttacc
tccaccaagaaagttatcaagaactctttaaccttgaaactaactacagaacaacgagag
attttggttggtttgtttctgggtggcttgcaaattgagtatgcaggggaaaagaagcaa
cattttgtccattttaagttcaaggataattccggtatacattcaatcttgaaaagacat
atatataacgagttccatgaatggctgcaacattccaatggctcaacagatgatattgat
gatgatgatgatgatgatatcccttcgaacttttcaacaatcccacatacttgttttggt
ttttatgctcttcaattctgggaagatgggaagcaaagcattcccaaattaattcatcgg
tggttgtcaccacgtgttcttgcttactggtttatgtatggcggatacacaacaccaagt
ggtgatattttgctcaaggtaaagggaagcaagagtgatgtagaaagggtgtttaaagca
ttaaaatcaaagtcactggatttcagggttaagcaaaagggcagagtattttggttggga
ttcatgggaagccattctacttgcttttggagacttatagaaccttaccttctagatgac
ttacaagacttcataaaagctgatgaacaaacctcggaaaatttaacagcagaaaagtca
agtatctggtcaagtaccgagtctgattcttga
DBGET
integrated database retrieval system
