Spinacia oleracea (spinach): 110791170
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Entry
110791170 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110791170
KO
K07573
exosome complex component CSL4
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110791170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110791170
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110791170
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110791170
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Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
CHASE5
P_T4SS_TraN
Motif
Other DBs
NCBI-GeneID:
110791170
NCBI-ProteinID:
XP_021851612
UniProt:
A0A9R0IM69
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Position
4:complement(13774856..13779681)
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AA seq
202 aa
AA seq
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MVEMDGENKQKVTPGDILGKAAELKAGKGTYAAVNAAGVKLIYASLTGCISLSPPPPDSP
DKRAVVEVTGHKAHGAVPEPGCTVLARVKKVMAKMASADIMCVGSKSIRENFTGIIRQQD
VRATEIDKVDMHASFRAGDIVRAVVLSLGDARAYHLTTAKNELGVVSAESTSGETMIPIS
WTEMQCPVTGQIEQRKVAKIGN
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggtagagatggacggtgagaacaaacaaaaagtgaccccaggagatattttaggaaag
gcggcggaacttaaagctggtaaaggaacttacgccgctgttaatgccgccggcgttaaa
ctcatctatgcttctctcacaggctgcatatctctctctcctcctcctcctgattctcct
gacaagagggcagtcgtggaggtaactggtcacaaagcgcacggtgcagtccctgaacct
ggttgcacagtccttgcacgtgtcaaaaaggtgatggctaaaatggcttcagcggatatc
atgtgtgttggtagcaagtctataagagaaaatttcacaggcataattagacaacaggat
gtaagagcaactgagattgacaaggtcgatatgcatgcttcgttccgagctggtgatatt
gtcagggcagtagttctatccctgggagatgcaagagcctatcacttgacaacggcaaaa
aatgaactgggagttgtatctgcagaaagtacttcaggtgaaacaatgataccaattagt
tggacagagatgcagtgccccgtgacaggtcaaattgagcagagaaaggtcgctaaaatt
ggaaattga
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