Spinacia oleracea (spinach): 110791183
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Entry
110791183 CDS
T05137
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110791183
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110791183
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
CaiF_GrlA
Serglycin
Motif
Other DBs
NCBI-GeneID:
110791183
NCBI-ProteinID:
XP_021851623
UniProt:
A0A9R0ILL7
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Position
3:24110937..24119251
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AA seq
504 aa
AA seq
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MLHIFFFLSLFLSPHLFAATTNLVLPHQHPDPEAVAESVHRMVNASLVRRQMLEESKHPT
SSACLTGNPIDDCWRCDPHWASNRQRLADCAIGFGQSAKGGKGGQIYVVTDSSDSDPVNP
KPGTLRYGVLQDEPLWIVFSSDMTIRLRYELVMSSYKTIDGRGANVHITGGGCITLQYVS
NIIIHNIHVHNCVPAGNALVRSSPTHVGYRSKSDGDGMTIFGSSNIWIDHCSLSSCTDGL
IDATVGSTALTISNSHFTHHNDVMLLGNSDGHVLDEGMQVTLAFNVFGEGVVQRMPRCRR
GYVHVVNNDFRYWEIYVIGGSDNPTINSQGNRFTAPANPFIKEVTRRVETGDKNWENWNW
RSEGDIMLNGAFFVPSGNGLTAQYAKASSTEPKSAASIDQITMNAGAFGDPRDTTNMPQG
GGTSTSSSQAKSGAGYSSSSGSGSGSGSGSGSGSGSEDYFGMMFGNGGPKSLSTASVFLA
TVVILIFCTITNHGNLLPLTLLCL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacattttcttctttctttctctttttctctctcctcatctatttgccgccacc
accaacctcgtactccctcatcaacaccctgaccctgaagctgttgcggaaagtgttcac
aggatggtgaatgcatcactagtaagaagacaaatgcttgaagaatccaagcatccaacc
tcatccgcttgcttaaccggcaacccaattgatgactgttggcgttgtgacccacattgg
gcgtcaaaccgtcagcggttagccgattgcgccattgggttcgggcaatcagcaaaggga
gggaaaggtggtcagatctacgtagtaaccgattcctccgactccgacccagtaaacccg
aaaccgggtacgctgcgatacggtgtgctccaggacgaaccgttatggatagttttctct
agtgatatgacaatcaggctcagatacgagctagttatgagtagttacaaaaccatcgac
ggccgaggagctaacgtccatattaccggtggtgggtgcatcacactacagtatgtctcc
aacataattattcacaacattcatgtccataattgtgtcccagcgggtaatgcgttagta
aggtcgagccccacccatgtggggtaccgctcgaaatcggacggtgatggcatgactata
ttcgggtcaagtaatatttggattgatcattgctctttatcttcttgtactgatgggttg
attgatgctactgtggggtccaccgctcttaccatttctaacagtcattttacgcatcat
aatgatgttatgctgcttggtaacagtgatggccatgtcttggatgagggaatgcaggtg
acattggcgtttaatgtgtttggagagggagtagtgcaaaggatgcctaggtgtagaaga
gggtatgtgcatgtagttaacaatgattttaggtattgggagatttatgttattggtggg
agtgataatccaacaatcaatagccaaggtaaccgcttcacagccccggctaacccgttt
attaaagaggtgacgaggcgtgtggaaacaggtgataagaattgggaaaattggaactgg
aggagtgaaggggacataatgctaaatggagccttctttgtgccttctgggaacggttta
actgcacagtatgccaaagcttccagtactgaacccaaatctgcagcgtccattgaccag
attactatgaatgctggtgcttttggcgaccccagggacaccacaaacatgccacaaggc
ggtggaacaagcacgagtagcagtcaggctaaatctggcgctggctacagttcaagttct
ggctccggttctggttctggttctggatctggatctggatctggtagtgaagactacttc
ggcatgatgtttggcaatggtggtccaaaatccttatctacagcctccgttttcttggct
actgttgtcattctaatattttgcacaattactaaccacggcaatctgctgcccttaaca
ttattatgcctatag
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