Spinacia oleracea (spinach): 110791284
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Entry
110791284 CDS
T05137
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110791284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110791284
03036 Chromosome and associated proteins [BR:
soe03036
]
110791284
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110791284
Coactivators
SAGA/TFTC/STAGA complex
110791284
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110791284
STAGA complex
110791284
TFTC complex
110791284
SAGA complex
110791284
SLIK complex
110791284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
LonB_AAA-LID
Motif
Other DBs
NCBI-GeneID:
110791284
NCBI-ProteinID:
XP_021851729
UniProt:
A0A9R0ILU0
LinkDB
All DBs
Position
4:complement(160723990..160729524)
Genome browser
AA seq
531 aa
AA seq
DB search
MSIVQKETIEVIAQSIGINNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD
VDAALKLRNVEPIYGFASNDPLRFKRAAGQKDLFYVNDLDLDLKNVTEAPVPRAPLDTSV
SVHWLAIEGVQPAIPENPPIETLMASSDSNKLEYKEEGIPIDIKLPVKHVLSRELQLYFD
KIIEVTTRKSDTVLFKEALRNLATNSGLHPLLPYFTCFIAGEVSRNLNKLSLLSGLTRLV
WSLLQNPHIHIEPYVHQLMPSVITCLVAKRLGNRYSDNHWELRDLSANLVARICQRFGHV
YHNLQPRITRTLLHAFLDPKKALPQHYGAIQGLAALGPSVVRMLILPNLEPYMQLLGPEM
QLEGQKNEFKRQEAWRVYGALLFAAGKCMHDQLKKFPSLPLPLARPFLKPCKNIVTMQPG
KRKASMDNMLQQPPLKKLSTNGAMGVVAGAMGVVAVNSMQGVAVGGSDGGLCSENIPGSS
GRRDKTDVQSQTLALAWKEETDGGRLLSSLFEHFDLSMFSFTPAPELSLFL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagtacaaaaggagacgattgaggtgattgctcagagcattggcatcaataat
ttatccccagatgttgctctcgctcttgctccagatgtcgaataccgcgttcgagagatt
atgcaggaggcgatcaaatgcatgcgacactcaaagcgcacaattttaacagcagatgat
gtcgatgctgccctcaagttgagaaatgtagagccaatctatggttttgcctcaaatgat
cctttgcgtttcaagagagctgctggacagaaggatttgttctatgttaatgaccttgat
ctagatttgaaaaatgttactgaagcaccagtgccaagagcgcccttggatacctccgtt
tcggtgcattggctagccatagaaggggtacagcctgccattcccgagaatcctccaatt
gaaactcttatggcttcatctgatagcaataaattagagtataaagaagaaggaatccct
attgacattaagctaccagtcaaacatgtcttatctcgagagcttcagctttattttgac
aaaattattgaggtcactacacgcaagtctgacactgtcctctttaaagaagctttgcgg
aacttggcaactaattcaggacttcatcctctgttaccttacttcacatgcttcattgct
ggtgaggtttctcggaatttgaataagttaagtctcctatctggattgacgcgtcttgtt
tggagtcttctccaaaacccacatatacatatagagccttatgtgcaccagctcatgcct
tctgtcattacttgtctggtagcgaagaggttaggaaacagatattctgacaaccattgg
gagctgagagaccttagtgcaaatctagttgccagaatatgtcaaagatttgggcatgtt
tatcacaatctccagccgcgaattaccaggacactgctccatgcttttttggatccaaaa
aaagccctgcctcaacattatggtgctattcaaggacttgctgcccttggacctagtgtg
gttcgtatgctcattctcccaaatctagaaccatatatgcaacttttggggccagaaatg
caactagaagggcaaaagaacgagtttaaaaggcaggaagcttggcgggtttatggggcc
ttattgtttgctgctggtaaatgcatgcatgatcagctgaaaaaatttccaagtttaccg
cttccgttggcaagacctttcttgaagccctgtaaaaatattgtgaccatgcaaccgggc
aagagaaaggctagcatggacaacatgctacaacaaccaccactgaagaaattatcgacg
aatggtgcaatgggagtggtggcgggtgcaatgggagtggtggcggtgaactccatgcaa
ggggttgccgttggtggatctgatggtggcctttgctctgaaaacatcccaggaagcagt
ggtagaagggataaaacagatgttcaatctcaaacacttgctctggcctggaaagaagag
acagacggtggccgtctgttatcctccctctttgaacactttgaccttagcatgttttct
ttcactccagctcctgaactatccttatttttgtag
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