Spinacia oleracea (spinach): 110791532
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Entry
110791532 CDS
T05137
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03082
ATP-dependent chromatin remodeling
soe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110791532
03083 Polycomb repressive complex
110791532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soe03036
]
110791532
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110791532
Histone modification proteins
HAT complexes
HATB complex
110791532
HDAC complexes
Sin3A-HDAC complex
110791532
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110791532
PRC2.2
110791532
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110791532
Heterochromatin formation proteins
Other heterochromatin formation proteins
110791532
Chromatin remodeling factors
NuRD complex
110791532
NuRF complex
110791532
NuRF complex (fruit fly)
110791532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD_LRWD1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_SPT8
MIOS_WD40
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
110791532
NCBI-ProteinID:
XP_021851975
UniProt:
A0A9R0IP21
LinkDB
All DBs
Position
4:complement(175683406..175685938)
Genome browser
AA seq
396 aa
AA seq
DB search
MAEEEETEMTEQQLNEEFAVWKKNTPILYDLVLCHPLEWPSLTVQWLPSQPYINPDSSLA
VHQLILGTHTSDDEPNFLMVADAHLPPNNGPCSSTPKVEIVKKFFVDGEVNRAECMPQKP
NLVAAKMTNLEVYVFDVSKEASSKGAEVCDPDLRLRGHEKEGYGLSWSPLKEGYLLSGSY
DCKICLWDASSMPQSKVLDPMSVFKAHENKVEHVAWHIKNENLFGSVSDDARLMIWDLRS
DKPQHSIIAHEKEVNYLSFNPFNEWILATASSDTTIGLFDIRKLDSPLHFLSSHTEEVFQ
VEWDPNHETVLASSSDDRRLMVWDLNRVGEEQLEGEAQDGPPELLFSHGGHKAKILDFSW
NKNEAWMISSVADDNTVQIWQMAESIYRDEDDMPAE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaagaagaaacggagatgacagagcaacaattgaatgaagaattcgcagta
tggaagaagaacacaccaatcctctatgatctcgtcctttgccatcccctcgaatggcca
tctctcaccgttcaatggcttccatcacaaccctacatcaatcctgattcatctcttgcc
gtccatcaactcatcctcgggacccacacctccgacgacgaacccaacttcctaatggtt
gccgatgcccaccttccccccaacaatggcccctgctcctctacccccaaggtggagatt
gtgaagaagttttttgttgatggtgaggtgaaccgagctgagtgtatgccacaaaagccg
aatcttgttgctgcaaagatgaccaatttggaggtgtatgttttcgatgtgtcaaaggaa
gccagctcgaagggggcggaagtgtgtgatcctgatttgagattgaggggtcatgagaag
gaagggtatgggctctcatggagtcccttaaaggagggttatttgttgagtggttcttat
gactgtaagatatgtttgtgggatgcgtcctccatgcctcaaagcaaagttcttgaccca
atgagtgttttcaaggcccatgagaacaaagttgagcatgttgcttggcatataaagaac
gaaaacttgtttggttcagtcagtgatgatgcaaggttgatgatctgggatctgcgctct
gataaaccccaacattctatcatagctcacgaaaaggaggtcaattatctatctttcaac
ccgtttaatgaatggatcctggcgacagcttcttcggataccaccattggactgtttgat
attcggaagctggactcacccttgcatttcttgtctagtcacactgaagaagttttccag
gttgaatgggatcccaatcatgagactgtgttggcatcatcttctgatgacagaagatta
atggtttgggaccttaacagggttggcgaggagcagttggaaggagaagcacaggatggg
cctccagaactccttttctctcatggaggacacaaagctaagatattagacttctcttgg
aataagaatgaagcttggatgatctcgagtgtggcagatgacaacacggtacagatctgg
caaatggctgagagtatataccgtgacgaggatgatatgccagctgaatga
DBGET
integrated database retrieval system
