Spinacia oleracea (spinach): 110791996
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Entry
110791996 CDS
T05137
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110791996
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110791996
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
DUF5111
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
110791996
NCBI-ProteinID:
XP_021852504
UniProt:
A0A9R0JZ66
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Position
2:complement(113607333..113614678)
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AA seq
640 aa
AA seq
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MSFLQAVQLTIQDHYVIIDNGILEMTISKPDGIVTKIKFNGIENLLEETNEEDNRGYWDL
NWSDPGSTGTTGYYDRVKGTNFQVVVEDEEMVEVSFTRIWNPTSKAKLVPLNIDRRFIML
QGSSGFYSYGIFEKLKEWPGFNLPQTRMVFKLNKKWFQYMAVADDRQRKMPLPDDRLPER
CQALDFPEAVLLTNPIEEEFKGEVDDKYQYSCEDKDLQVHGWICTDPPTGFWQITPSDEF
RTGGPFKQNLTSHVGPINLAMFMSAHYAGEHMVAKFAQGEAWKRVFGPVFTYVNCVPKEV
DCQWLWDDAKVQVVIETESWPYSFPNSEDYPTSEQRGNLSGRLLVHDRYFDDDYNPANGA
YIGLASPNESKSWQLEGKGYQFWTTTDEDGYFFINGIRASDYNLYAWVPGFIGDYVCDTD
VSVTPGCEIDMGELVYEPPSDGPILWEIGIPDRTARGFYIPDPNPKYVNKLFLDHPDRFR
QYGLWERYAELYPNEDLVYTIGESDYEKDWFFAQVTRKKGNTYQGTTWQIKFNLEQVYQD
GVYKLRLALATANQAELQVRVNNPKAEPPIFTTGLIGKDNAIARHGIHGLYRLYTANIQG
SKLVEGDNTIYLTQAKGGSPFVGIMYDYIRLEGPPNSYRS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcttgcaggcagtacaacttactatccaagaccattatgttatcattgacaat
ggaatactcgaaatgaccatatcgaaaccagatggaatcgtgacaaagatcaagttcaat
ggtatagagaatttgcttgaagaaacaaatgaagaagacaaccgagggtattgggacctt
aattggagtgatcctggatctacaggaacaaccggatactatgatagagtcaaaggaacc
aactttcaagttgtagtagaggatgaagaaatggtggaagtgtctttcacaagaatatgg
aaccccacatctaaagccaaacttgtgccattgaacattgatagaaggttcataatgctc
caaggctcatcaggtttctactcgtatggtatttttgagaagttaaaggaatggcctgga
tttaatcttcctcaaacaaggatggttttcaagcttaataaaaagtggtttcaatatatg
gcagtagccgatgacaggcaaagaaaaatgccacttccagatgacaggttaccagaaagg
tgtcaagccctagatttccctgaagcagtgcttcttactaacccaattgaagaagaattt
aaaggagaggtggatgacaaataccaatattcatgtgaagacaaggatctccaagtccat
ggatggatatgcacagatccacctaccggattctggcaaataacgcccagtgatgagttc
agaactggtgggcctttcaagcagaatcttacctctcatgttggcccaatcaaccttgct
atgttcatgagtgcacattatgctggggagcacatggtagctaaatttgcacaaggtgag
gcatggaaaagggttttcggcccggtttttacgtacgtcaattgtgtacctaaagaagtt
gattgccaatggttgtgggatgatgctaaagtccaggtagtgattgaaacagaaagttgg
ccatattcatttccgaattctgaagattatccaacatctgaacaaaggggtaacctctct
ggtagactgttagttcatgacaggtactttgatgatgattataacccagcaaatggagca
tatataggcttagcttctcctaatgaatcaaaatcttggcaactggaaggcaagggctac
caattttggacaacaacagatgaagatggttatttcttcataaatggtatcagagctagt
gattacaacttgtatgcttgggttcctggcttcataggtgactatgtttgtgacaccgat
gtttctgtaactccaggttgtgagattgatatgggggagcttgtgtatgaacctccaagt
gatggaccaatattatgggaaatcggcattcctgatcgaacagctagagggttttacatc
cctgatcctaaccctaaatatgtcaacaaactctttcttgatcatcctgatagatttagg
caatatggtctatgggaaagatatgcagaattatatcctaatgaagatttggtctataca
attggtgaaagtgattatgagaaagattggttctttgctcaagttaccaggaagaaagga
aatacataccaaggaactacatggcaaatcaagttcaacctagaacaagtgtaccaagat
ggagtttataaactcagattggcacttgcaaccgcaaaccaggcagaattacaggttcga
gtaaacaatccaaaagcagaacctccaatatttacaacaggactaatagggaaagataat
gcaattgcaagacatggaattcatgggctttacaggctttacactgcaaacatacaagga
agtaagcttgttgaaggtgataatacaatttatttgactcaagcaaaaggtggttctcct
tttgtaggcattatgtatgactacattcgattagaagggccaccaaattcttatcgaagt
tga
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