Spinacia oleracea (spinach): 110792233
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Entry
110792233 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110792233
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110792233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110792233
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110792233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
110792233
NCBI-ProteinID:
XP_021852742
UniProt:
A0A9R0INU8
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Position
4:162715979..162725936
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AA seq
320 aa
AA seq
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MANLPQSLSLNAPAYGPGLGGASPANPQSNTNVDRKMQSAEILVLDLSNPDRRENALLEL
SKKRELFTDLAPLLWNSFGTIAALLQEIVSIYQVLSPPSLSPVQSNRVCNALALLQCVAS
HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLANMVAALAE
QPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFASCLREDPTTRKWLQQLLHN
VGGSRVAFQPGTGFEHMLVN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatctgccacaatctctctccttaaacgcaccagcttacggcccaggactcggt
ggcgcgtcgccggcgaacccgcagtcaaacactaacgttgaccggaaaatgcagtcggct
gagattctcgtcctcgacctcagcaatcccgaccgccgtgaaaacgcgcttctcgaactt
tccaagaaaagagagttgtttacggatttggctcctttgctgtggaattctttcggaact
attgctgcccttttacaggagattgtgtcgatataccaagtgctgtctccaccttcctta
agtccagtgcagtcaaaccgagtctgcaatgctcttgccctattgcagtgtgtagcatct
caccctgatacgcggatgttatttttgaatgctcacattcctttatatctgtatcctttc
ctcaatacaacaagcaaatccaggccttttgagtacttgcgactaactagcctgggtgtc
attggtgctctggtaaaggttgatgatacagaagtgattagtttccttctttcaacagaa
ataattccattgtgtcttcgtaccatggaaatgggcagtgaattatcaaaaacagtagct
acatttatagtccagaagattcttctggacgatgtgggcttggattacatatgtacaaca
gcagagcgcttttttgcagttggaagagttttagccaacatggttgctgcattggctgag
caaccttcttcacggctgctgaaacatattattagatgttaccttcgactttcagataat
ccaagagcatgcgatgctctgagaagctgcttgcctgatatgttgagggatgcgaccttt
gctagttgccttcgtgaagatccaactacaagaaagtggcttcaacagttgcttcacaat
gttggaggatcccgagttgcatttcaacccggaactggatttgaacatatgttggtgaac
taa
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