Spinacia oleracea (spinach): 110792379
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Entry
110792379 CDS
T05137
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110792379
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110792379
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Adeno_hexon_C
CarbopepD_reg_2
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
110792379
NCBI-ProteinID:
XP_021852898
UniProt:
A0A9R0INZ3
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Position
2:complement(113577986..113589280)
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AA seq
694 aa
AA seq
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MLMIMQGAQLCLVILILVNLLEVLHANYITSSSSSMQLTNRNSTIDQKVYESSEDIQGPS
PRVQLLYQDNYIVLDNGIIQVTVLNPEGSVIKIHYNGIANLLEQLNDESDRGYWDVVWKG
EGVTRKKGNLDRLPCTDFKVIVETDEQVEVSFTRTWNSSFYGKLPPLNIDKRFVMLRGSS
GFYAYAIYERPKDFPGFTLANTRLAFKLNKLWFNYMAMADDRQRQLPLPDDRSPERSEVL
AYPEAVLLTNPIEPEFKGEVDDKYQYSGEAKDIQVHGWICSKPATGLWQIIPNNEFRSAG
PTKQYLTSHVGPTSLSVLLSTHYSGEELMATFEDGEPWKKVLGPLFVYANSMTSEGDSRQ
LWEDAKEQLSVEAKRWPYSFAVSDDFPSSDQRGSVNGSLLVYDRYLKTNTSARKAYVGLA
APGEVGSWQRESKGYQFWTRTDDGGHFTIENIRPGNYNLYALIPGFIGDYRYNDTLNISA
AGSSMDMGDLVYDHPRDGPILWEIGIPDRSAGEFFVPDPDPKLVNPLYLTRDKYRQYGLW
ERYTDLYPDEDLVYTVNVSDYQKDWFFAQVTRNVNNTYQGTTWQIKFQLDKLDPSGTYYL
RIALASATSSELQVRINDRHEKPPLFTSGLIGYDNTIARHGIHGLYWLYNVSIPGDKFLL
GNNTIFLTQAWGLSPWRGILYDYIRLEAPVDDVV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgatcatgcaaggagctcaattgtgcctcgtaattttgattttggttaatctc
ttggaagttcttcatgccaattacatcacctcatcatcatcttctatgcaattgacaaat
agaaattcaacaatcgaccaaaaagtatacgaaagttcagaggatatacaaggaccatca
ccaagggtgcaacttctttatcaagataactacatagtgttggacaacggcataatacaa
gtgacggtattgaatccagagggaagtgtcatcaaaattcattacaatggcatcgctaat
ttgctcgagcagctcaacgatgaatccgacagagggtattgggatgttgtctggaaagga
gaaggagttacaagaaaaaagggaaacctggataggcttccatgtacagattttaaggtc
atagtagagacagatgagcaagtagaggtctcctttacaagaacatggaactcatccttc
tatggcaaacttccccctttgaacattgacaaaaggtttgttatgcttcgaggttcctct
ggtttctacgcttatgctatctatgaacgcccaaaagattttccgggttttactctagca
aatactcggcttgcattcaagctcaacaaactatggtttaactacatggctatggcagat
gaccggcaaagacaattgcctctcccggatgatcgttcacctgagagaagcgaagtttta
gcttaccctgaagctgttttactcaccaacccaattgagccagagtttaaaggagaggtc
gatgacaaataccaatactctggtgaagccaaagacatccaagtacatgggtggatatgc
agcaaacccgccactggactttggcaaatcattcctaacaacgagtttcgatctgccgga
cctaccaaacaatatcttacatcacatgttggcccgacttccctctctgtactcctgagt
actcactactcaggtgaagaacttatggcaacgtttgaagatggagagccgtggaaaaaa
gttttaggacctctttttgtgtatgctaattctatgacaagtgagggtgactcgcgccaa
ttatgggaggatgcaaaagaacagttgagtgttgaagcaaaacgttggccttacagcttt
gcagtatcggatgatttcccatcatctgaccagcgaggcagtgttaacggtagcttactc
gtctatgacaggtatctgaaaacaaatacatcagcacgcaaagcgtatgttgggcttgca
gctccaggagaagttggatcttggcaaagagaaagcaagggatatcaattctggactaga
acagatgacgggggtcatttcaccattgaaaatatacgacctgggaactataatctctat
gctttgatccccggcttcattggagattacagatacaatgacacacttaatatatcagca
gcaggtagttctatggatatgggtgaccttgtgtacgatcatccaagagacggacctata
ttgtgggagataggcattccagaccgttctgctggagaattcttcgttcctgatcctgat
ccaaagcttgtcaatccgctctatcttacgcgtgacaagtatcggcagtatggtttatgg
gaaaggtatactgatttgtaccctgacgaagatttggtttatactgtaaatgtgagcgac
tatcagaaagattggttctttgctcaagttactaggaatgtaaacaacacgtatcaagga
acgacatggcagatcaaattccaactcgacaaactcgacccctcgggaacctattacttg
agaatagcactagcatcagcaactagttcagaattacaggtaaggattaatgatcgacat
gaaaaacctccattatttacgagtggactaatagggtacgacaatacgattgctaggcat
ggcatccatgggttgtattggctttacaatgtgagcatacccggtgacaaatttttgttg
ggtaataataccattttcttgacacaagcttggggtcttagcccatggagaggcattttg
tatgactacattcgtcttgaagctcccgttgatgatgtcgtctaa
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