Spinacia oleracea (spinach): 110792605
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Entry
110792605 CDS
T05137
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110792605
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110792605
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
110792605
NCBI-ProteinID:
XP_021853122
UniProt:
A0A9R0IPE9
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Position
6:complement(97643033..97659252)
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AA seq
683 aa
AA seq
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MNVSWRKAKSWGLALFITMAVEMFLVSQCFAKDTHGRPKKYDHTTSPGVTLNVTDKEVVI
DNGIVQITIANPEGYLTGVSYGGVHNILEYHNKEPNRGYWDVVWDTNGYNGTDWLLGSSF
NVVVENEDQVEVSFTYKWDSTTWNTSQVWRIPANVDRRYIMLRGSSGFYAYSILDREEGM
PAAKMYQIRSVYKLDEQRFHYMAISDDRQRTMPMPQDRDTGLPLAFKEAVLLTNPTNPDF
RGEVDDKYQYSCEDKNNKVHGWISFDPQIGFWIITPTNEFRSAGPVKQDLTSHVGPISLA
MFHSAHYAGYDVTMSFQQGEPWKKVFGPYYVYLNSISQDTDFHQLWDDAKHQMIQETRSW
PYEFPLSNDFPKSVERGFVFGRLLIHDRYKLRTIMAGSYAWIGLAAPGVAGSWQTETKVH
VGYQFWTRADRNGGFLIKGVHEGTYNLFGWVPGFIGDYVYIEDIIITQGSVIKLGNLVYE
PLRNGPTLWQIGIPDRTALEFYVPQPSSLFVNKLYTDSDQNKFRQYGLWERYAELYPDND
LIYTVGQSDYHTDWFFAQVTRKAENNTYKPTTWQIIFALHDVIPSTNYTLRIALASATRS
ELQVRFNDPELTIPHFTTMVIGSDNAIARHGIHGIYRLFNVDVPSEWLCVGNNTIYLKQT
KHESPFFGVMYDYIRFEGPPPTT
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgagttggaggaaagccaaaagttggggtttagccttgttcataacaatggct
gtggagatgttcttggtctctcaatgttttgctaaagacacccatggaagaccaaaaaag
tatgaccacacaacctccccaggagttaccttgaacgtgacagacaaagaagtggtgatt
gataatggcattgtgcaaatcacaattgcaaatccagaaggctatctgacaggtgttagc
tacggtggagtgcataacatacttgaatatcataacaaggaaccaaacagagggtactgg
gatgtagtttgggacacaaatggttacaacggcactgactggttactaggttcgagtttt
aatgtggtggtagaaaatgaggatcaagtagaggtatcatttacttataaatgggattca
accacatggaacacatcacaagtatggagaattcctgctaatgtagacagaaggtatata
atgctaaggggatcctccgggttctatgcatattcgatcttagatcgtgaggaaggaatg
cctgcagcaaagatgtaccaaataagaagtgtttataagcttgatgaacaacggtttcac
tatatggccatctcagacgacaggcaaaggaccatgcctatgccacaggatcgcgataca
ggccttcctcttgcttttaaggaagctgttcttttgactaatccaacaaatccagatttc
agaggcgaggtagatgacaagtaccagtactcgtgtgaggacaaaaacaataaggtgcac
ggttggatatcatttgatccacaaattgggttttggattattacacccaccaatgagttc
cgttctgctggacctgttaagcaagatctcacatcccatgttggccctatttcattagct
atgtttcatagtgcacactatgctggttatgatgttaccatgtcatttcaacaaggggaa
ccatggaagaaggtgtttggcccttattatgtttaccttaattcaatttctcaggacaca
gatttccatcaactctgggatgatgcaaagcaccagatgatacaagaaactagaagctgg
ccttacgaatttccattatcaaatgacttccctaagtctgttgaacgcggttttgtattt
ggtcggttgcttatccatgacaggtataaattgaggacaatcatggctggaagttatgct
tggattggacttgctgcaccaggtgtagccggatcttggcaaaccgaaacaaaggtgcat
gtgggttatcagttttggactcgagcagaccgtaatggaggattcttaataaaaggggtt
catgaaggtacttacaacttgtttggatgggttcctggtttcattggagattatgtgtac
atcgaagacatcataataactcaaggttcagtgatcaaattaggtaatcttgtgtacgag
ccactaagaaatggaccgacattatggcaaataggcattcctgaccgtactgcgttggag
ttctatgttcctcagccaagtagcttatttgtaaacaaactttacactgacagcgatcag
aacaaattcagacaatatgggctttgggaaagatatgctgaactgtatcctgacaacgat
ctcatttacacagttggtcaaagtgattatcatacagactggtttttcgcacaggtgact
aggaaggcagaaaataatacatataaaccaactacatggcagataatattcgcgctccat
gatgtgattccgtctacaaactacactctaagaattgccttggcttctgccacgagatca
gaattgcaagtaagattcaacgatccagagctcactattccccacttcactacaatggtt
ataggctcagataacgccattgccagacatggtattcatggcatatacagattgtttaat
gttgatgttccaagtgaatggctttgtgttgggaacaacactatatatctcaagcaaacc
aaacatgaatccccattcttcggagtcatgtatgattatattcgtttcgaaggcccccct
ccaacaacttga
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