Spinacia oleracea (spinach): 110792950
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Entry
110792950 CDS
T05137
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03440
Homologous recombination
soe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110792950
03460 Fanconi anemia pathway
110792950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soe03032
]
110792950
03400 DNA repair and recombination proteins [BR:
soe03400
]
110792950
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
110792950
DNA replication proteins [BR:
soe03032
]
Eukaryotic type
DNA Topoisomerases
110792950
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
110792950
FA (Fanconi anemia) pathway
110792950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
110792950
NCBI-ProteinID:
XP_021853461
UniProt:
A0A9R0IQ02
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All DBs
Position
1:10004190..10024447
Genome browser
AA seq
861 aa
AA seq
DB search
MAPRVLMVAEKPSIALSIATVLSNGQMSTRRGSTEVHEFDAMFLGLHSHFTVTSVIGHVF
SVDFTAAFQDWNTTDPLDLFQAPTLKSESNPKAHIRRHLSQEARGCSHLVLWLDCDREGE
NICFEVIECTGFHFKEGEARVYRARFSSVTEKDIAKAMENLVEPNRNEALAVDARQEIDL
KVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLNINTFRPQKFWAVHPY
ISHKGYELKLEWDREKLFDLDVSLMFQKLVMEDGKVEIINVFKKQEHKSKPSGLNTVNLL
KIASSSLGFGPQMAMQIAERLYIQGFISYPRTESTAYPSSFDFRGALVAQKNNPLWGGYV
QTLLVDGYHKPRSGTDVGDHPPITPMRSATEEMLGHDAWRLYQYICQHFIGTVSPDCKYM
RTKVEFSSGGESFGFTGQYVTAEGFTSIMPWLAISEKKLPEFAKGERIKISKVELYEGNT
TPPDYLTESEIISLMEKHGIGTDASIPVHINNICERNYVQVQSGRRLVPTALGITLVRGY
QCTDPDLCLPDIRSFIEHQITLVAKGQADHSLVVKHVLEQFKQKYVYFVKQIEHMDALFE
AQFSPLSESGRALSKCGKCARYMKYISQQPQRLYCGSCEDVYYLPQKGSIKLYKEIVCPL
DNFELLLFSMPGPEGKSFPLCPYCYNNPPFEGVDKLFGAPKTGPAKLGKGAGMPCFLCPH
PTCPHSLIAQGVCACPECSGTLVLDPVSAPKWRLDCNMCNCLVFLPQGAHRISTTKERCP
DCESTIVEVDFNKNNTPLADGTTLYAGCILCDELLHSLIEMKHGKSSFRRFGGRGRGRGR
GRGRGRGGRKNVDPKMSFRDF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggctccgagagttctcatggttgcggagaagccgagcatcgctctctccatcgcaacg
gttctctctaatggtcaaatgtctaccaggaggggaagtaccgaggtgcatgaatttgat
gcgatgtttttgggtcttcacagtcattttacagttacttcagtgattgggcatgttttt
agtgtagatttcactgcagcatttcaagattggaacacaacagatcctctggatcttttc
caagcgcccactcttaaatcagagtctaatccaaaggctcatatccggagacatttgagt
caagaagctcgtggttgtagccatcttgtattgtggctggactgtgaccgagaaggggag
aatatttgttttgaagttattgagtgcactggatttcatttcaaagaaggggaagcaaga
gtttatcgtgctcggttttcctctgttaccgagaaagacattgcaaaggcaatggaaaat
ctcgttgagccaaacagaaatgaggccttggctgtggatgcgcgccaggagatagacttg
aaagttggagttgcctttacccgcttccagactagctactttcagggaaaatatggaaac
ttggactctcgagttatctcttatgggccatgtcaaactccaactcttggattttgtgta
caacgctatttgaatatcaacactttcaggccgcagaagttctgggctgtgcatccctac
atctctcacaagggctatgaactcaaattggagtgggatcgcgaaaagttgtttgactta
gatgtctccttgatgtttcaaaaattggttatggaagacggcaaggttgaaataatcaat
gtatttaagaagcaggagcacaagagtaaaccctctggtttgaacacagtcaatcttctt
aagattgcttcaagttcattgggctttgggccacagatggctatgcagatagcagaaagg
ttgtatattcaagggtttatcagttatcctcgcacagaaagtactgcttatccgtcttcg
tttgacttccgaggtgcacttgtggcacaaaagaataatcccttatggggaggttatgta
cagaccctactggttgatggttaccataaacctcgttcaggaactgatgtaggcgatcat
ccacccattaccccaatgcgatcagctactgaagagatgcttggtcatgatgcttggaga
ttgtatcagtatatttgtcagcactttattggcactgtgtctccagactgcaaatatatg
aggacaaaggttgaattttcaagtggtggagaatcatttggttttacaggacagtatgtc
actgccgaaggattcacctccattatgccttggttggctataagcgagaaaaagcttcct
gaatttgcaaagggtgaaagaattaagatatcaaaagttgaactatatgaggggaacact
acgcctcctgattaccttactgaaagtgagatcatttccctcatggaaaagcatggaata
ggcacagatgcatccattcctgtacacatcaacaacatatgtgagcgcaattatgtacag
gtacaaagtggacggaggttggttcctactgctttgggcatcactcttgtccgaggttac
caatgcactgatccagatctttgcctgccagacattcggagttttattgaacatcagatt
actctagttgccaagggtcaagcggatcattcacttgttgtgaaacatgttcttgaacag
tttaagcagaagtatgtatattttgtcaagcagattgaacacatggatgcactatttgaa
gcccaattttctcctctatcagaatccggccgtgcgttgagtaaatgtggaaagtgtgca
aggtatatgaagtacatttctcaacaaccacaacgcctctattgcggttcttgtgaggat
gtgtactatcttcctcaaaaaggctcaattaagctgtacaaggaaattgtttgccctttg
gacaattttgaactgttgctcttctccatgcctggtccagaaggcaaatcatttccccta
tgcccttactgctacaacaatcctccattcgaaggtgtagacaaactctttggtgcaccc
aaaactggtcccgccaaactgggtaagggtgcggggatgccatgtttcctctgcccccat
cctacatgtccgcattctctgatagcccaaggtgtttgtgcttgtccggagtgcagtggt
acacttgtcctggatcctgttagtgctcccaaatggcggcttgactgtaatatgtgcaac
tgtcttgtctttctacctcaaggtgctcaccggatctcaaccacgaaagagcggtgccct
gactgtgagtctactatcgtagaagttgactttaataagaataacacacctttggcagat
ggaactactttgtatgcaggatgtattctttgtgatgaactccttcattcactgattgag
atgaagcatgggaaatcttcttttaggcgttttggaggaagaggtaggggaaggggaagg
ggaagaggaagaggacgaggtggaaggaaaaatgttgatcctaaaatgagtttccgggat
ttctga
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