Spinacia oleracea (spinach): 110793013
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Entry
110793013 CDS
T05137
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03030
DNA replication
soe03420
Nucleotide excision repair
soe03430
Mismatch repair
soe03440
Homologous recombination
soe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110793013
03420 Nucleotide excision repair
110793013
03430 Mismatch repair
110793013
03440 Homologous recombination
110793013
03460 Fanconi anemia pathway
110793013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soe03000
]
110793013
03032 DNA replication proteins [BR:
soe03032
]
110793013
03400 DNA repair and recombination proteins [BR:
soe03400
]
110793013
Transcription factors [BR:
soe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110793013
DNA replication proteins [BR:
soe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110793013
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110793013
MMR (mismatch excision repair)
110793013
DSBR (double strand breaks repair)
HR (homologous recombination)
110793013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
zf-like
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
110793013
NCBI-ProteinID:
XP_021853529
UniProt:
A0A9R0IQ43
LinkDB
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Position
2:complement(9089716..9102908)
Genome browser
AA seq
624 aa
AA seq
DB search
MPINLTRNSLAAIMDGDINSKPLVQVLDIRLISSNQERYRLMLSDAVSTHQAMIAVQLND
RVNSGQVRKGSVIQLLEYICSAVKDRKIIVILNMEIIMPDCEIIGNPVMTTGADSSVGYA
LPNNNPSNPVRGSNTRMAAPSNSYNTQNFRPTIQPAYQPPPSYKNHGPVVKNEAPARILP
IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF
YDVIEIGKVYMISKGSLKPAQKNFNHLKNEWEIFLEATSTVDLCPDEDVSIPKQQFSFRP
ISEIETVENNSILDIIGVVISVNPSVPIMRKNGMETQRRNINLKDMSGRSIELTLWGDIC
NREGQEVQELVDSGYFPVLAVKAAKVNDFSGKSVGTISSTQLFINPDIPEAHSLAEWFHQ
GGKDCASQSISRDVMPLGGKNDVRKTISQIKDEGLGRSEKPDWVTVKATLSFIKTDNFCY
TACPLMIGDRQCNKKVTRSGNSRWVCDRCNQEFEECDYRYLLQAQIQDHSGVAWVTAFQE
TGEEILGCPAKELYALKSEEQDDDRFAEAIRSKIFVPFLFKLKIKEETYGEEQRVKTTVV
RADRLDYAAESRYLLDTMTKLRRR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccgataaatctgacgcgaaattcgcttgcagctataatggacggcgatatcaattcc
aaacctctggttcaggttctggacatcaggctcattagttcaaaccaggaacggtaccgt
ttgatgttatccgacgccgtttcgactcatcaagcgatgattgctgttcagcttaacgac
cgcgttaattccggccaagttcgtaaaggctcagttattcaattgcttgagtatatttgt
agtgctgttaaagatcgcaagattatcgtcatcctcaatatggaaattattatgcctgat
tgtgagattatagggaatccagtgatgaccactggagccgactcttctgttggatatgca
ttgcctaataataatccttctaatcctgttagaggaagcaatacacgaatggcagcacca
agtaacagttacaacacacagaatttcagacccactattcagcctgcataccagccaccc
cctagttacaaaaatcatggtcctgttgtgaagaatgaggcaccagcacgtatacttcca
attgctgcattaaatccttatcagggtcgttgggctattaaagcaagagtcacagctaaa
ggtgatcttcgccgttataacaacgctaaaggtgacgggaaggtgttttcctttgatctc
cttgattcagatggtggtgagattcgtgttacatgctttaatgctgttgttgaccgcttt
tatgatgttatagagattggaaaggtttatatgatctcaaagggttccctaaaacctgct
cagaaaaactttaatcatttgaagaatgagtgggaaatttttctggaagcaacttctact
gttgatctttgcccagatgaagatgtttcaatacccaaacaacagtttagcttccgacct
atcagcgaaattgagactgttgaaaacaattccattttagacatcatcggtgttgtaata
tcggtcaatccttccgtccccataatgaggaagaacgggatggaaacacaaagaagaaat
ataaatttgaaagatatgtcaggaagaagcatagagctgaccctttggggagatatctgc
aaccgagaaggtcaagaggtgcaagaattagttgattccgggtactttcctgtcttagct
gtgaaggctgcaaaggtcaatgatttcagtgggaaatccgtgggtacaatttcttcaacc
cagctctttattaaccctgatattcccgaagctcacagtttggctgagtggtttcatcag
ggaggaaaggattgtgcttcccagtcaatctcaagagatgttatgcctcttggaggaaag
aatgatgtgcgcaaaactatttcccagatcaaggatgaaggtcttgggagatcagaaaaa
ccagactgggttacagttaaggccactttatcattcatcaaaacagataacttttgttac
acagcgtgcccgttgatgattggtgatagacaatgcaataagaaagtcacaagatcggga
aattcaagatgggtttgtgatcggtgtaaccaagaattcgaggagtgtgattaccgctac
ttgctccaagcacagattcaggatcattcaggtgtggcatgggtaactgctttccaagaa
actggggaagagatcttgggttgccctgcgaaagagttgtacgctttgaaatctgaagag
caagatgatgataggtttgctgaggctattcgtagtaagatctttgttccgttccttttc
aagcttaagataaaagaagaaacctatggtgaagagcagcgagtaaaaacaacagtagtg
agagcagatcgactggattatgcagcagaaagcaggtatctgcttgatacaatgacaaag
ctccgtcgacgatga
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