KEGG   Spinacia oleracea (spinach): 110793433
Entry
110793433         CDS       T05137                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:soe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110793433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:soe04131]
    110793433
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:soe04147]
    110793433
Membrane trafficking [BR:soe04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    110793433
Exosome [BR:soe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110793433
  Exosomal proteins of other body fluids (saliva and urine)
   110793433
  Exosomal proteins of colorectal cancer cells
   110793433
  Exosomal proteins of bladder cancer cells
   110793433
SSDB
Motif
Pfam: VPS28 ARM_KNTC1_3rd IFT52_central
Other DBs
NCBI-GeneID: 110793433
NCBI-ProteinID: XP_021853997
UniProt: A0A9R0IRR6
LinkDB
Position
6:55293803..55295403
AA seq 209 aa
MEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDVIAPSDYETECLKLIAHFKTLS
SSLKDTVPSIESFADTYKMDCRAALNRLVTSGVPATVEHRSAAASSSTNSAATVAECVQN
FITSMDSLKLNMVAVDQVYPLLSDLSTSLNKLSLLPPDFEGKTKMKEWLGRLSKMGASDE
LTEQQARQLHFDLESSYNSFMAALPHAGN
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaagtgaaactatggaatgataagcgtgaaagagaaatgtatgagaattttgccgag
cttttcgccattattaaagctactgagaagcttgaaaaggcttacattagggatgttatt
gcaccttcagactatgaaactgagtgccttaaactgattgcccacttcaaaaccctttca
tcatcgttgaaagacactgtcccaagcattgagagctttgctgatacatataaaatggat
tgccgggccgcgttaaataggctggtaacttctggggttcctgctacagtggaacacaga
tcagctgctgcttcttcttccacaaattcagctgccactgttgcagagtgtgttcagaac
ttcatcacatccatggactcattgaaattgaacatggtggcggttgatcaggtttatccc
ctgctttcggacctctcaacgtcgttgaacaagctcagtttattgccgcctgattttgaa
gggaagaccaaaatgaaagagtggctcggacggttgtctaagatgggagcttctgatgag
ctgactgagcaacaagcaagacagcttcactttgatctcgagtcttcgtacaactctttc
atggctgcgttgcctcatgctggaaattga

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