Spinacia oleracea (spinach): 110793446
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Entry
110793446 CDS
T05137
Name
(RefSeq) mRNA export factor GLE1
KO
K18723
nucleoporin GLE1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
soe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110793446
03015 mRNA surveillance pathway
110793446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110793446
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110793446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
DNA_repr_REX1B
YjcZ
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
110793446
NCBI-ProteinID:
XP_021854016
UniProt:
A0A9R0IR35
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Position
1:complement(133903674..133917385)
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AA seq
656 aa
AA seq
DB search
MGMIKLELRCPKNVNGISIDPNPSWNFNDLMSELSSLENKLYNNGSDSPLNPKPFVKSPA
RDFRKIGRRGKNEVKAKAFVMRVDDDDDKMDEDDDEMDESDGKDGTEARSLVPVSRFTCN
DIYLSESDDSDNEEMQQMQVSVMDKMGVVEGAFLELTHEHQLGVKEEIRNQLAALETQLV
VEKEKSTSALVQVEKNTDARRQMDRKLDLHYQRKIAEALDNHLTAIQRDHEHISQLEERK
IRDDAAVEEAKRKEKALQEEKLRQQKDKEEQEAAKLEAAKKAEEERKTAQEAEKLAKEAA
DKLDKEKAPSTTSAPNVRLEVKSAGKLVRATENALKLEERRLQTYKELEDRNQQLINSGS
HTDYNRVERDIKRTISQISGTVENVRSKGTKLVEILNNPACPQSVVVAMLAKKVISIYEA
PNTNFNSSAFACGHVIVYVSSQVPAVMDCLLAEFHKACIYTVPKHIMYSKAGFETEEAYY
KAIGYREDGKLETTDCYLERLESLMKLYGALVQTDARVQNKHGLEEGWAWLARFLNGLPP
NRYTAVALGAFLEMAGFALHRKYKNQFTKILNAISREFVPTLRARDPNAGSKITRILDYI
ESQKFLQEPVGWRLREALLSNSSIPEPEHNQQQYHQQQYHQQQYNHAPNRRYTYRR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggggatgatcaaattggagttacgatgtccgaagaatgtaaacggaatctcaattgac
ccgaaccctagttggaatttcaatgatcttatgtcggagttgagctcattggagaataag
ctctacaataatggttctgattctccgttaaaccctaaacctttcgtcaaatcaccagct
cgcgattttcgcaagattggaaggagaggaaagaatgaggtaaaggcgaaggcattcgta
atgcgagtggatgatgatgatgacaagatggatgaagatgatgacgagatggatgaatcc
gacggcaaagatggaactgaggctaggagcttggtgccagtgagtcgatttacttgtaat
gatatttatctcagtgaaagtgatgattcagacaacgaagagatgcagcagatgcaagtt
tctgtcatggataaaatgggggtggtagaaggtgcattccttgagctgacgcacgaacac
cagcttggcgttaaggaggaaatcaggaaccaactagcagcattggagacacagttggtg
gttgaaaaggagaagtctacatcagcccttgttcaagttgagaaaaacactgatgctaga
cggcagatggacagaaagctggacttgcattaccaacgcaagattgctgaagctcttgat
aatcacttaacagccattcaaagggatcatgagcacatatcacagttagaagaaagaaaa
ataagagatgatgctgctgttgaagaagccaaaagaaaagagaaagctttgcaagaagaa
aaattgcgccaacagaaagataaggaagaacaagaggcggctaaactggaggctgctaaa
aaagctgaagaggagagaaaaactgcacaggaagctgaaaaattagctaaagaagctgca
gataaattggacaaggaaaaggcaccctcaaccacatcagctccaaatgtgcgattggaa
gtaaagtcagcaggtaagttagtcagggctacagaaaatgctctgaaacttgaggagcga
aggcttcagacttacaaggaattagaggataggaaccaacagttaatcaactctggttct
cacacggactacaaccgcgtagaacgggatattaagaggacgataagtcaaataagcggg
acagtagaaaacgtaagatccaaaggaactaaactagtggagatcttgaacaacccagca
tgccctcagtctgttgttgtagcaatgcttgcgaagaaggttatctctatttatgaagca
ccaaacacaaatttcaacagttctgcttttgcatgtggccatgttattgtttatgttagc
tcacaggtcccagctgtcatggactgtctccttgctgagtttcacaaagcttgcatctac
actgttccgaagcatataatgtactccaaggctggttttgaaactgaagaagcttattac
aaagccattggctatagagaagatgggaagttagagacaacagattgctatctagaacga
ttagaatctctgatgaaactatacggggctctagttcagacggatgctcgtgttcagaac
aaacatggcttggaagaaggttgggcttggcttgcacggtttttaaacggtctcccacct
aatagatacaccgctgttgctctcggagctttcctagaaatggccgggtttgctctacat
agaaaatataagaaccagtttacgaagatactgaacgccatttcaagggagtttgtgcct
acactgagagcacgagacccaaatgctggttcaaaaataactaggatcttggattacata
gaatcacagaaatttcttcaggagccagttggatggcgtcttcgggaagcgttgctgtca
aatagttctattccagaaccagaacataatcaacagcaatatcatcaacagcaatatcat
caacagcaatataatcatgcaccaaacagacgttatacttaccgaaggtag
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