Spinacia oleracea (spinach): 110793508
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Entry
110793508 CDS
T05137
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110793508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110793508
03036 Chromosome and associated proteins [BR:
soe03036
]
110793508
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110793508
Coactivators
SAGA/TFTC/STAGA complex
110793508
Chromosome and associated proteins [BR:
soe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110793508
STAGA complex
110793508
TFTC complex
110793508
SAGA complex
110793508
SLIK complex
110793508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
110793508
NCBI-ProteinID:
XP_021854084
UniProt:
A0A9R0IR76
LinkDB
All DBs
Position
4:94809884..94826270
Genome browser
AA seq
583 aa
AA seq
DB search
MEPPPPPAPTPLPSAQPPAIQSTDQSPSLSQPQQPPPQPPLPSQLSQPLPSPSLPPPQPQ
SQPQPQLPQQQPPPPNPNLNPTNTPQPYPQQQQQQQHQQSNNRVAPFNNRPPWSQFSSQF
QSSASPSTSSSAGPLPPLRGGIAIGVPAHHPPSSGPSQPSASFSSTFGVQYGGALPRQSV
SLPDPSVVSSSSPSPARSITHGLPSMGMTCSQIRPGGVPPSALHQQRPIQAASGIRPQTT
SNNLASVPQNFQGHGVLRASSVTPPSTSMSSISQSQQSPHQPWLSAPQGRPPLPSQSFRP
QVNAQPLQQRSHIPQQSPQLVQATSQPQQLLSSPQQHQLLPSQQHQLLPSQQHQLLPSQQ
QQQQFLPSQQQQFLPSQQPQHFLASNQLQENNGQQLPSSRVSQLLANQQQIMRVQANQKP
PSTAIGQASIVHSGPIEITNAIEICEPCTTILSKRSIQELVNQIDPSEKLDPDVEDVLVD
IAEDFIDSITTFGCSLAKHRKSNTLEAKDILLHLERTWNMTLPGFTGDEIKTYKKPVVND
VHKERLALIKKSHAGADHKTSAGPATGNVKGHLAKATPNVVGS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaccacctccgcccgctccaacacccttaccctccgcacaaccacctgctata
cagtcaactgaccaatctccctccctttcgcaaccccaacaaccaccgcctcaaccacct
ctaccatcacaactatcacaaccacttccttctccctctcttccaccaccacaacctcaa
tcacaaccacaaccacaactaccgcaacaacaaccccctcctcctaaccctaatctgaac
cccacaaatacaccccaaccttacccccaacaacagcaacaacaacaacatcaacaatca
aataacagggtagcaccctttaataacagaccaccgtggtctcaattttcttctcaattt
cagtcatctgcttctccgtctacttcttcttctgccggccctctgccgcctctgaggggt
ggcattgcaatcggagttcctgcccaccaccctccttcatccggtccttctcaaccgtcc
gcctcattttcctctacttttggtgttcagtatggtggggctcttccccgtcagtctgtc
agtctgccagatccttctgttgtctcctcttcctccccgtcgccagcaaggtctataacg
catggattgccaagcatggggatgacatgctctcaaatacggcctggcggggttccgcct
tctgcgcttcatcaacaaagaccaattcaggcagcatcaggaattagacctcagacaact
tccaacaatttggcttctgtgccccagaattttcaaggacatggcgtgctgagggcctcc
tctgtaactcctccaagtacgtcaatgtctagtatatcacaaagccagcagtctccacat
cagccatggttatctgccccacaggggcgcccccctttgccatctcagtcttttagaccc
caggtgaatgcccaaccattgcagcagagatctcatatccctcagcaatcacctcagctt
gtccaagcaacttcccaaccacagcaattgctgtcttctccgcaacaacatcaattattg
ccgtctcaacaacatcaattattgccgtctcaacaacatcaattattgccgtctcaacaa
cagcaacagcagtttttgccttcacaacaacagcaattcttgccgtcgcaacaaccacaa
catttcttagcatcaaatcagttacaagagaataatggacagcagctcccgtcatctaga
gtttcacaacttttagctaatcaacaacaaattatgagggtgcaggcaaaccagaagcct
ccctcgactgcaattggccaagcaagcattgtccattctggcccaattgagattacaaat
gctatagaaatttgtgaaccttgtaccacaatcctcagcaagagaagcatccaggagctt
gtcaatcagattgatccatctgagaaattagatcctgatgttgaagatgttctggtcgac
attgctgaagattttattgactcgattacgacgtttggttgttcattggcgaaacatagg
aagtcaaatacattggaagctaaggacatactgctgcatctagaaagaacttggaatatg
acccttcctgggtttaccggagatgaaatcaagacctataagaaaccggttgttaatgat
gtccacaaagagcgcctagcactgataaagaaatctcatgcaggagctgaccataaaacc
tctgctggaccggctaccggaaacgttaaagggcatttggctaaagcaactccaaatgtc
gtgggatcttga
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integrated database retrieval system
