Spinacia oleracea (spinach): 110793638
Help
Entry
110793638 CDS
T05137
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110793638
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110793638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110793638
NCBI-ProteinID:
XP_021854225
UniProt:
A0A9R0ITG7
LinkDB
All DBs
Position
1:complement(134139884..134142168)
Genome browser
AA seq
403 aa
AA seq
DB search
MAFNLSLLLVFSLFVPTFINASHVQDPELIALEVQEKIINATTRRNLGYLSCGTGNPIDD
CWRCDHKWAQNRQRLADCSIGFGKGAIGGKNGKMYVVTDKRDDPLNPRPGTLRWGVIQDK
PLWIIFDRDMVIKLKEELMVNSFKTIDGRGANVHIAGGPCITIQYVTNVIIHGLNIHDCK
RGGNAMVRDSPSHYGWRTISDGDGISIFGGSHIWVDHCSLSSCTDGLIDAIHGSTAITIS
NNYMTHHNKVMLLGHSDSLTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
EMYAIGGSAAPTINCQGNRFLAPNDPDNKEVTKREEWPQSVWKKWNWRSQGDLMLNGAFF
TASGAGASSSYARAYSLSAKPSSFVSSITMSAGALNCKKGSHC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaatctctccttactcttagtcttctctctctttgttcctactttcatcaac
gcctcccatgtccaagatcccgagctaatagcacttgaagtacaagagaaaatcattaat
gccactacaaggaggaatttggggtacctctcatgtgggaccggaaacccgatcgacgac
tgttggcggtgcgaccacaagtgggcccaaaaccgccaacgactagccgattgctccatt
gggttcggcaagggtgcaatcgggggtaaaaacggaaaaatgtacgtggtcacggacaag
agagacgacccgttgaacccgagaccgggaaccctaaggtggggtgtgatccaagacaaa
ccattgtggatcatatttgaccgggacatggtgatcaaactcaaggaagagttgatggtt
aactcttttaagacaattgacggtagaggggctaacgtccacattgcgggtgggccatgc
ataaccatacaatacgtaacaaacgttataatacatggtttgaacatacatgattgtaaa
cgtgggggtaacgctatggtacgtgactccccgtcacactacgggtggcggacgatatcg
gacggtgatgggatctcgatcttcggcgggagtcatatttgggttgaccattgttcactc
tcgagttgcaccgatggtctaattgacgcgatccatgggtcgaccgctataaccatttct
aacaattatatgacccatcataacaaggttatgttgttaggtcatagtgattcactcact
agagataagaatatgcaagttactattgctttcaaccattttggtgaaggtttagtccag
agaatgccaaggtgtagacatggatattttcatgtggtgaataatgactatactcattgg
gaaatgtatgcaattggaggaagtgcagcacctacaataaattgccaaggcaacagattt
cttgctcctaatgaccctgataacaaggaggtgacaaaaagagaggaatggcctcaaagt
gtatggaagaaatggaattggagatcacaaggtgatctaatgttgaacggagccttcttc
acggcgtcgggagcaggggcttcatcgagctacgccagagcgtacagtttaagcgcgaaa
ccttcgtctttcgtaagctctatcaccatgtcagctggtgcacttaactgcaagaaaggc
tctcattgttag
DBGET
integrated database retrieval system
