Spinacia oleracea (spinach): 110793850
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Entry
110793850 CDS
T05137
Name
(RefSeq) squalene synthase 2-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00100
Steroid biosynthesis
soe00909
Sesquiterpenoid and triterpenoid biosynthesis
soe01100
Metabolic pathways
soe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110793850
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
110793850
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
soe01006
]
110793850
Enzymes [BR:
soe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
110793850
Prenyltransferases [BR:
soe01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110793850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF2615
Motif
Other DBs
NCBI-GeneID:
110793850
NCBI-ProteinID:
XP_021854470
UniProt:
A0A9R0K110
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Position
4:145551397..145559564
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AA seq
422 aa
AA seq
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MGSLGAILKHPDEFYPLLKLKMAVKEAEKQIPPELHWGFCYSMLHKVSRSFALVIQQLGT
ELRNAVCVFYLVLRALDTVEDDTSIATDVKLPILRDFHKHIYDRDWHFACGTKHYKVLMD
EFHHVSTAFLELDRGYQVAIEEITRRMGAGMAKFICNEVETIGDYDEYCHYVAGLVGLGL
SKLFHNTGLEDLASDDLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL
EDLKYEENSEKAVQCLNDMVTNALFHVEDCLKYMSDLRDPAIFRFCAIPQIMSIGTLAIC
YNNLQVFRGVVKMRRGLTAIVIDQTNTMPDVYGAFYDFACMMKPKVDKRDPNATKTLSRI
EAIQKICMDSGTLNKRKLHVVKNKSAYTPIMMVVFFIVLAVMFARLSANRQNNYLSAVMA
FL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttaggtgcgatattgaaacacccagatgaattttacccacttttgaagttg
aagatggccgttaaagaggcggaaaagcagatcccacctgaacttcattggggtttctgt
tattctatgcttcacaaagtttccagaagtttcgctcttgttattcaacagcttggcact
gagcttcgcaatgctgtatgtgtgttttacttggtccttcgagccctcgacactgtagag
gatgatacaagcattgctacagatgtcaaattgcctatcctgagagattttcataagcac
atatatgatcgtgactggcattttgcttgtggtacaaagcactacaaagtcctgatggat
gagtttcaccatgtctcaactgcctttctggagcttgatagaggttaccaggtggcaatt
gaggaaatcaccagaaggatgggcgcagggatggcaaaatttatctgcaatgaggtagaa
accattggtgactatgatgaatattgccactatgttgccggacttgttggtttagggttg
tcaaagcttttccacaacactggtttggaggatctagcttcagatgatctttccaattca
atgggtttatttcttcagaaaaccaacattattcgtgattatcttgaagatataaatgag
attcccaaatgtcgcatgttttggccgcgggagatttggagtaaatatgtcaacaaactc
gaggacttgaaatatgaggagaactcagagaaggcagttcaatgtttaaatgatatggtg
acaaatgcattatttcatgtagaagattgcctaaagtacatgtctgatttgcgggatcct
gctatattccgattttgtgctattccacaaatcatgtccattggaactttagctatatgc
tacaacaatcttcaagtgttcagaggtgtggtgaaaatgagacgcggtctcactgctata
gttattgatcagacgaacacaatgcctgatgtttatggtgctttctatgatttcgcctgt
atgatgaaaccgaaggttgacaagagggatccaaatgcaacaaaaacactgagtaggatt
gaagcaatccagaaaatctgcatggactctggaactctgaacaaaaggaaattgcacgtt
gtgaagaacaagtcagcatacactccaatcatgatggtggtgttcttcattgtattggcg
gtcatgtttgctcgtctatctgcaaaccgacagaataattatttatcagcggtaatggcg
ttcttgtga
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