Spinacia oleracea (spinach): 110793852
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Entry
110793852 CDS
T05137
Name
(RefSeq) squalene synthase 2-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00100
Steroid biosynthesis
soe00909
Sesquiterpenoid and triterpenoid biosynthesis
soe01100
Metabolic pathways
soe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110793852
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
110793852
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
soe01006
]
110793852
Enzymes [BR:
soe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
110793852
Prenyltransferases [BR:
soe01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110793852
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
110793852
NCBI-ProteinID:
XP_021854473
UniProt:
A0A9R0IS03
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Position
4:145565706..145570638
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AA seq
411 aa
AA seq
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MGILKHPDEIIPLLKLMIAVKNAEKQIPTEAHWGFCYSMIRKVSRSFAIVMQPLATQLRN
AACVFYLILRALDTVEDDTSIATDIKLPILRAFHQHIYEYDRQWHFSCGTGDCKVLMDEF
HHVSTAFLELDRGCQVVIEDMIKRTGEAMAQFIGKEVVTVNDYDAYCQYVVGPIGLGMSK
LFHNPGMEDLAPEDLSNSVALLLQKTNIIHDYLEDINEIPEARKFWPREIWCKYVNQLED
LKCDENSEKAVECLNEMVTNSLSHVEDCLTYLSALRDHAIFRASAIPLIMSIGTLALCYN
NKQFFRGPVKMRRGLAAVVFDQTNTMPDVYGAFYDFASMMKSNVDKKDPNAMKTLRKIEA
IQSICRDSGTLNKRKLHIVRIKSVYSSIMIMVLFIVLAVIFARLYANLNDN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggattttgaaacacccagatgaaatcattccacttttgaagttaatgattgctgtg
aaaaatgcagagaagcaaatcccaactgaagctcactggggtttctgctattctatgatt
cgcaaggtttccagaagtttcgccattgttatgcaaccacttgctactcagcttcgtaat
gctgcatgcgttttttacttgatccttcgggccctcgacaccgtagaggatgatacaagc
atagctacagatatcaaattgcctattctgagagcttttcatcagcacatatatgaatat
gatcgccaatggcatttctcttgtggtacaggggactgcaaagtgttgatggatgagttt
catcatgtctcaactgcttttcttgagcttgatagaggttgtcaagtggtaattgaagat
atgatcaaaagaacgggtgaagcaatggcacaattcatcggcaaggaggtagtaacagtt
aatgactatgatgcatattgccaatatgtagtaggacctattggtttaggaatgtcaaag
cttttccataaccctggtatggaggatttagctccagaggatctttccaattccgtggct
ttacttttgcagaaaaccaacattattcatgattaccttgaagatattaacgagattcca
gaagctcgcaagttttggccccgtgagatttggtgtaaatatgtcaaccaactggaggac
ttgaaatgtgatgagaattcagagaaggcagttgaatgtttaaatgagatggtgacgaat
tccttatcgcatgtggaagattgcctaacctacttgtctgctttgcgcgatcatgctata
tttcgggcctctgctattccactaatcatgagcattggaactttagctttatgctacaac
aacaaacaattctttagaggcccggtgaaaatgagacgtggtcttgctgctgtagtattt
gatcagacaaacacaatgcctgatgtttatggcgccttttatgatttcgcctctatgatg
aaatccaatgttgataagaaggatccaaatgccatgaaaacactaagaaagattgaagca
atccaaagtatttgtagggattctggaactctgaacaaaaggaaattgcacattgtgagg
attaagtcagtctactcttcaatcatgataatggtgctgttcattgttttggcagtcata
tttgctcgtctgtatgccaacctaaatgataattag
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