Spinacia oleracea (spinach): 110793948
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Entry
110793948 CDS
T05137
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110793948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110793948
Enzymes [BR:
soe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110793948
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110793948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110793948
NCBI-ProteinID:
XP_021854576
UniProt:
A0A9R0K125
LinkDB
All DBs
Position
1:complement(100598151..100623091)
Genome browser
AA seq
1677 aa
AA seq
DB search
MDQITEVATETVVAVHFGVMTDEEIQKLSVVKITNRNILNMVGRPEPGGLSDPALGPSDD
HSLCKTCGHRTFYCPGHFGHIDLVSLIYHPLLFDMLYRVLQNTCLACYHFKAPQEEVEMC
IGKLNLIMKGDIVGARELGERPDDIDNSPPLDELSEGSNHQRGWTSFQLTEALSVLKSFL
KRRPPKCNNCKAKNPPITKPTFGWFHMGGLNDNNIKQNIIRGHKLDGPFAEGDDDTSISE
VEDDDAGQKASNRQRKKKDDLQLEFSKWKKPRSLLPTEVRGIVERLWENEAQFCSFICDI
QQHQGFPSQKKAAFMMFFLKTLLVSPTKFRPPSKGGELVMEHSETVLLSKILDSNISLAN
AYEQHAEHNFILSRWMNLQQSVNFLFNSKNAAGPGQKDIASGICQLLEKKEGMFRQKMMG
KRVNFACRSVISPDPYLAVNEIGIPPVFALKLTYPERVTPWNVTSLRQAIVNGPEIHPGA
THYVDKITSKLPLIRKSRFSFARKLPSSRGVTTQHGKIFSNDCEGKVVLRHIRNGDIVLV
NRQPTLHKPSIIALKVRVLPGEKTIRFHYANCDSFNADFDGDEINVHFPQDEISRAEGYN
IVNANNQYIVPTRGDPKRALIQDHIVGAVLLTKRDTFLTLEEFNELLYMSGVGSYGASSF
NANSGKKISVVDAEYVIQAYPPAIVRPKRLWTGKQVITAILNHITRDSLPFTAKKRAKIA
REYFGKDESKSKNVEILSTADEVSQKKKKKSRTSKKEVVGDSAKSIRKDSEEKIESGMEK
RMKGNSSHSIDEDIVFVYKNELVQGIIDKEQFGKYGLVHTVQEMYGANAAGNLLSVLSRV
LTAFLQMHGFTCGVQDLLMEQPYDIKRRSLLDVCLNCGEEVHQQFIGHEKKHLDFLGMQI
EIEKAIRRNGESGIALLDGMMRSKLNTLSSKVTKLFPEGLIKPFRKNCLSLMTLSGAKGG
TFNFQQISLLLGQQELEGKRVPRMVSGKTLPCFVPWDCSARAGGFISDRYLTGLRPQEFY
FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLTVQYDYTVRDADGSIVQFRYGEDGVD
VHQKNYMQEFEALALNQSLIVSKSPLSHTNDACLSTYVEEDNEVPNQLAKEAKEFFYNHA
LATDFQRTQPKGHLNFSKLVKNKYYKSLAQPGEPVGIIAAQSVGEPSTQMTLNTFHHAGR
GEMNVTLGIPRLQEILMTASKAIKTPTMTCPLLKCKAKDDAEQLAAKLKRIKIADLIEKM
EVSVVPFAIKKHEICSIYKLKIKLYDPELYPPHTDITLEDCHNTLIHDYMREMEAALKSH
LLLLSRICGIKSDSQPKDSDEMDEAGFGSKSQTEGDDDGGDDDDEDDEEGGDQSSKTRKR
KEQTTDEVDYEGDSEDEVEEGNHVSERENEVELGEDKDEDEDEDEDGKESLEQPSGPDSQ
EQKEKPETRQRKTSDDDKAIYVNCDELYFEVHFKLSGESHILMAQIAEKTAKKVYVKTAG
KIEQCKVVELHLDDSGKGGIPMLRKGKESRAALQTAGVDFAAFWNMQDELDVKLISSNDV
YAMLSTYGVEAARATIITEIFTVFGHYGVTVDMRHLTLIADYMTHTGSYRALSRSGGIIE
SISPFSKMSYETASKFLTYAAAHGEVDNLETPSARICLGLPAKVGTGCFDLMHDFDV
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatcactgaggtggcgacagagacagtggtggcggtgcatttcggtgtaatg
acagatgaagaaatacagaagctcagtgttgtgaagataacaaaccggaatatattgaat
atggttgggcggcctgagccgggtggcctgagtgatcctgctttgggtccatcggatgat
cacagtctttgcaaaacgtgtggtcatcgaactttttattgccctgggcattttggtcat
atcgatctcgtgtcactcatttatcaccctttattgttcgatatgctctaccgagttcta
cagaatacctgtttggcttgctaccattttaaggcacctcaagaggaggttgagatgtgc
atcggtaaattgaacctcataatgaagggtgatattgttggggccagagagttaggtgag
cgtcctgatgacattgataacagccctcccttggatgagctttctgagggttccaaccat
cagcgtggctggacctcttttcaacttactgaagcactttcggtcttgaaaagtttcttg
aagagaaggcctcccaaatgtaataattgtaaggcgaagaatcctcccatcactaaacct
acctttggttggtttcacatgggtggcttgaatgataacaacataaaacaaaatattatc
agagggcacaagttggatggaccttttgctgaaggagatgatgatacgtctatctccgag
gtagaagatgacgatgctggacaaaaagcatcaaataggcaaaggaagaaaaaggatgat
ttgcagttagagttttcgaagtggaaaaaaccacgatctctcttgccaacagaagtcaga
gggatagtagagcgtctttgggaaaatgaggctcaattttgctcgttcatttgtgatatt
cagcaacatcaaggttttccatcacagaagaaagcagcttttatgatgttcttcttaaaa
actcttcttgtttctccaacgaagttccgtccaccatctaagggaggtgaattagtgatg
gagcattctgaaactgttctattgagcaagattttggactctaatatatccttggcgaat
gcttatgaacagcacgctgagcataactttattcttagtagatggatgaatcttcaacaa
tccgtaaattttctgttcaatagcaagaatgctgcaggtccaggacaaaaggatatagct
tctggaatatgtcaattactggaaaaaaaagaggggatgttccgacagaagatgatgggg
aaacgggttaattttgcttgtcgttctgtaatatcacccgatccttatttagctgtcaat
gagattggcattcctcctgtttttgcattgaagttgacctatccggagagagtgactcca
tggaatgtgacaagcttacgacaagctattgttaatgggcctgagattcaccctggggcc
acacactatgttgataagataacttcaaaactaccacttatcaggaagtctcgtttttct
ttcgcaagaaaattaccttcttcaagaggagtcacaacccaacatgggaagattttcagt
aatgattgtgaaggaaaagttgtactccgtcacatacgcaatggggacatagttctcgtg
aatcgccagccgacactccataaaccaagtataattgcacttaaggttcgggtcttgcct
ggagagaagactattcgttttcattatgccaactgcgactccttcaatgctgattttgac
ggtgatgagataaatgttcactttccacaagatgagatatctcgggctgaaggttacaac
attgtcaatgctaataaccagtatatagttcctactcgtggtgatcctaaacgagcctta
attcaggatcacattgtaggtgctgtacttctcaccaagagggatacttttcttaccttg
gaagaatttaatgaacttctttatatgtctggtgttggttcgtacggggcatcctcgttc
aatgccaattctggcaagaaaatatctgtagtggatgcagaatatgtcatccaggcttat
ccaccagctatagttagacctaaaaggctttggacagggaagcaggttataactgccatc
ttgaatcacataacgagagattctttaccatttactgctaaaaaacgtgctaaaattgct
cgagaatattttgggaaggatgaatcaaagagcaagaatgttgaaattcttagtacagct
gacgaggtttctcaaaagaagaagaagaaaagtcggacctctaagaaggaggttgttgga
gattcggcaaaaagcattcgaaaagattctgaagaaaagattgaaagtgggatggaaaag
aggatgaaggggaactccagtcacagcattgatgaagatattgtatttgtttacaagaat
gagctggttcaaggaattattgacaaggagcagtttggcaagtatggtttagttcatact
gtgcaagagatgtatggtgctaatgctgcaggaaacctactttctgttttgagtcgtgtg
ttgactgcttttctacagatgcatggttttacttgtggagtccaagatcttctcatggaa
caaccttatgacatcaagcgaagaagcttgcttgatgtttgccttaattgtggtgaagaa
gttcaccaacaattcattggtcatgagaaaaaacatttagactttttgggaatgcaaata
gaaatcgagaaagcaattcggcgtaatggagaatctggaattgcacttcttgatgggatg
atgagaagcaagcttaatacacttagctcaaaggtgactaagctgttccccgaaggtcta
atcaagccttttcggaagaactgcctatctctcatgacactttccggagctaaaggtggc
acattcaacttccaacaaatttctctcttgctgggtcaacaagagttggaagggaagcgt
gtacctcgaatggtctctggaaagacattaccatgctttgtcccttgggactgttcagct
cgagctggaggatttatcagtgatcgttatctcactggccttcgtccccaagaattttat
ttccattgcatggctggtcgtgaagggttagttgatacagctgtcaaaacatctcgtagt
ggatacctacaaaggtgcttgataaaaaatctggagtgcctcactgttcaatatgactac
acagttcgtgatgcagatggttcaattgtccagtttcgctatggagaagatggggttgat
gttcatcagaagaattatatgcaagaatttgaagcattagcattgaatcaatcactgata
gtgagcaaaagtcctctaagtcataccaatgatgcatgtttatccacgtatgttgaagaa
gataatgaagttccaaatcaacttgccaaggaagctaaggaattcttttataatcatgca
cttgcaacggattttcaacgtacacaaccaaaaggtcatttgaatttttcgaaattggtt
aagaacaaatattacaagagtcttgcccagcctggggagcctgttggtattattgcagct
caatcagttggggaaccatctacacaaatgacattgaatacattccatcacgctggtcgg
ggagaaatgaatgtgacgctgggaattccacgtttgcaggaaatattaatgactgcatca
aaagccattaagactccaactatgacctgccctttgctaaagtgcaaggcaaaggatgat
gcagagcagcttgctgcaaagttgaagaggattaaaattgccgatttaatagaaaaaatg
gaagttagtgttgtgccgtttgccattaagaagcatgaaatctgcagtatttacaagctt
aaaataaagctctacgatcctgaactttatcctcctcacactgatataacattggaagac
tgtcacaataccttgatacacgattatatgagagaaatggaagcagcactgaaaagtcat
ttgcttttgctttctagaatatgtggtatcaaatctgactcccagccaaaagattctgat
gaaatggatgaagctggctttgggagcaagtcacagacagaaggagatgatgatggtggt
gatgatgatgacgaggacgatgaagaagggggagatcaatcttcgaagactcgtaaaagg
aaagagcaaactacagatgaggttgattatgagggcgactctgaagatgaggttgaggaa
gggaatcacgtatctgaacgtgagaatgaggtagaactgggtgaggataaggacgaagat
gaggatgaagatgaagatggaaaagaaagtctggagcaaccgtctggccctgattcacaa
gaacaaaaggagaaaccagaaactagacaaagaaaaacatcagatgacgataaagcaatt
tatgttaattgtgatgaactatattttgaagttcatttcaagttatctggtgaatcgcac
atcttgatggcacagattgctgagaagacagctaagaaagtttatgtaaagactgccggc
aaaattgagcaatgtaaagtggtggagcttcatttggatgattccggaaagggagggatc
ccgatgcttagaaaaggtaaagaatctcgtgctgctctccaaactgctggtgtagatttt
gctgcgttttggaatatgcaagatgagcttgatgtaaagctcattagttcaaatgacgtt
tatgcaatgcttagtacttatggggttgaagctgctagagctaccattataacagagatc
ttcacagtttttgggcattacggagttacagtagacatgcgacacttaaccttgatagct
gattacatgacacatacggggtcatatagggcgttgagcagaagtggtggcataattgag
tcgatttctccgtttagcaagatgtcttatgaaactgcttctaagttccttacatatgca
gcagctcatggagaagttgacaacttagagactccttctgctaggatttgtcttggcttg
cctgctaaagttggtactggttgtttcgatttgatgcatgattttgacgtgtaa
DBGET
integrated database retrieval system
