Spinacia oleracea (spinach): 110794040
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Entry
110794040 CDS
T05137
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110794040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110794040
03110 Chaperones and folding catalysts [BR:
soe03110
]
110794040
03029 Mitochondrial biogenesis [BR:
soe03029
]
110794040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
soe04147
]
110794040
Enzymes [BR:
soe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110794040
Messenger RNA biogenesis [BR:
soe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110794040
Chaperones and folding catalysts [BR:
soe03110
]
Heat shock proteins
HSP60 / Chaperonin
110794040
Mitochondrial biogenesis [BR:
soe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110794040
Exosome [BR:
soe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110794040
Exosomal proteins of other body fluids (saliva and urine)
110794040
Exosomal proteins of breast cancer cells
110794040
Exosomal proteins of colorectal cancer cells
110794040
Exosomal proteins of bladder cancer cells
110794040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
110794040
NCBI-ProteinID:
XP_021854666
UniProt:
A0A9R0K153
LinkDB
All DBs
Position
1:4481386..4487685
Genome browser
AA seq
608 aa
AA seq
DB search
MASTFTSMSAMAAPGAARIMDKKPLTSADKLSSLASMSSSSTLGRRSNVVMRNSRSVKVN
AMAKELYFNKDGSAIKRLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
GIEKTTKALVAELKLMSKEVEDSELADVAAVSAGNNPEVGSMIAEAMSKVGRKGVVTLEE
GKSAENSLYVVEGMQFDRGYISPYFVTDAEKMTVEYENCKLLLVDKKITNARDLVNILED
AIRGSYPVLIIAEDIEQEALATLVVNRLRGSLKIAALKAPGFGERKSQYLDDIAILTGGT
VIRDEVGLTLDKADKDVLGHAAKIVITKDSSTIVGDGSTQEAVAKRVAQIKNQIEVAEQE
YEKEKLTERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL
LRLSSKVDAIKAQLQNVEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDDPRY
GYNAATGKYEDLMSAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEAEPAMPAGNP
MDNSGYGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacgttcactagtatgtctgcaatggctgctcctggtgcagcccgtatcatg
gataagaaacctttgacctctgcagacaagctatcctcgttggcgtccatgtcttcttct
agcactctaggtagacgatccaatgttgttatgcggaattcacggtcagtaaaggtcaac
gccatggccaaagagttgtattttaacaaagatgggtctgctatcaagaggttgcaaaat
ggggtgaacaagcttgctgatttagtgggggttacattgggtccaaagggccggaacgtt
gttctagagagcaaatacggttccccaaagattgtcaatgacggtgtcactgttgcgaag
gaggttgagttggaggacccagttgaaaatattggggcaaaattagtgagacaggcagct
gctaagactaatgatttggctggagatggaacaactacttctgttgttcttgcacaaggt
ctaatcgcagaaggagttaaggtggttgcagcgggagcaaaccccgttctgatcacccgg
ggtattgagaagactactaaagcattagtagctgagctcaagttgatgtcaaaagaggta
gaagacagtgaactagctgatgtagcagctgtcagcgctggcaacaaccctgaagtgggg
agtatgattgctgaagcaatgagcaaagtaggaagaaaaggtgttgtgacccttgaagaa
ggaaaaagtgctgagaacagtctctatgttgttgaagggatgcagtttgatcgtggttat
atttcaccttattttgttactgatgctgagaaaatgactgtggagtacgagaactgcaag
ttgcttcttgttgacaagaagatcacaaatgcaagggatttagttaacatcttggaagat
gcaatcaggggaagttaccctgtgttgatcattgcagaagatattgaacaggaagccctg
gctacccttgtggtgaaccggttgagaggttcactgaaaattgcagcacttaaggctcca
ggatttggtgagcgcaagagccagtatcttgatgacattgctatcctcacaggaggaact
gtgatccgagatgaggtcgggctcacacttgacaaggctgacaaggatgttttaggccat
gctgccaaaatagttataacgaaggattcatccacaatcgtgggtgatggaagcactcaa
gaagctgtggcaaagagagttgcacaaataaagaatcaaattgaggttgctgagcaagaa
tacgagaaggaaaagcttactgagagaattgcaaaactttctggtggagtggctgttatt
caggttggagcacaaactgagacagagttgaaagaaaagaaactgagagttgaagatgcc
cttaatgcgacaaaggcggctgttgaagaaggaattgttgttggtggtggatgtactcta
ctccggctttcatccaaagtggatgctatcaaggctcaacttcaaaatgtcgaagaaaag
gttggggcagatattgttaagagagcactaagctatccgttgaagctgattgccaaaaat
gctggtgtaaatggaagtgttgtcagtgaaaaggtactgtcaagcgatgacccaagatat
ggatataatgcggcaactggaaagtacgaggacttgatgtctgcaggaatcattgatcca
actaaggtcgtgagatgctgtttggagcatgcatcttcagtagcaaaaacatttttgatg
tcggattgtgtagttgtcgagatcaaagaagctgagccagcaatgcctgctggaaatcca
atggataactcgggatacggttactaa
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